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sample_size finding for reference mode #166

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miseminger opened this issue Apr 26, 2024 · 0 comments
Open

sample_size finding for reference mode #166

miseminger opened this issue Apr 26, 2024 · 0 comments
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@miseminger
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If the lineage is provided, find_sample_size() in vcf2gvf.py looks for whichever line in the stats file starts with the lineage name. This could cause an error if the lineage it looks for is the partial/beginning of another lineage name. Need to rewrite the string matching to include the whole lineage name, excluding the file extension.

@miseminger miseminger added the bug Something isn't working label Apr 26, 2024
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