requirements.in

h5py==2.9.0
matplotlib==3.1.1
nibabel==2.5.1
numpy==1.17.4
scikit-image==0.15.0
scipy==1.3.1
python-dateutil==2.8.2
pyyaml==5.4.1

# Lapy installation from git
git+https://github.com/Deep-MI/LaPy.git#egg=lapy

# Pytorch installation
# By default, pip will install torch v1.2.0 gpu version for CUDA 10.0
# If you want CUDA 9.2, add +cu92 to both the torch and torchvision version
# If you want cpuonly option, add +cpu to both the torch and torchvision version
# See also instructions for v1.2.0 (Wheel) at: https://pytorch.org/get-started/previous-versions/
-f https://download.pytorch.org/whl/torch_stable.html
torch===1.2.0
-f https://download.pytorch.org/whl/torch_stable.html
torchvision===0.4.0

# The dependency scikit-sparse is optional (but recommended) for the recon-surf script only.
# Due to its dependency on numpy, it can however not be installed sequentially with the other
# packages (see also https://github.com/pypa/pip/issues/25 for an indepth discussion on the topic)
# scikit-sparse==0.4.4