.travis.yml

language: r
r:
    #- bioc-devel
  - bioc-release
# warnings_are_errors: true
sudo: false
fortran: true
cache: packages

addons:
  apt:
    packages:
      - libxml2-dev
      - libssl-dev
      - openssl

r_packages:
  - Rcpp
  - RcppArmadillo
  - BH
  - corpcor
  - combinat
  - NMF
  - R6
  - dplyr
  - ggplot2
  - reshape2
  - pheatmap
  - progress
  - Matrix
  - Rtsne
  - knitr
  - rmarkdown
  - testthat
  - BiocManager

os:
  - linux
  - osx

bioc_required: true
bioc_packages:
  - GEOquery
  - Biobase
  - preprocessCore
  - BiocStyle

before_install:
  - if [ ${TRAVIS_OS_NAME} = 'osx' ]; then brew install libxml2; brew install openssl; brew install cairo; fi

script:
  - R CMD build .
  - FILE=$(ls -1t *.tar.gz | head -n 1)
  - R CMD check "$FILE" --no-vignettes --no-build-vignettes

after_success:
  - Rscript -e 'covr::codecov()'

notifications:
  email:
    recipients:
      - zayats1812@mail.ru
    on_success: always
    on_failure: always