Thesis.tex

                
% ----------------------------------------------------------------------
%                   LATEX TEMPLATE FOR PhD THESIS
% ----------------------------------------------------------------------

% based on Harish Bhanderi's PhD/MPhil template, then Uni Cambridge
% http://www-h.eng.cam.ac.uk/help/tpl/textprocessing/ThesisStyle/
% corrected and extended in 2007 by Jakob Suckale, then MPI-CBG PhD programme
% and made available through OpenWetWare.org - the free biology wiki


%: Style file for Latex
% Most style definitions are in the external file PhDthesisPSnPDF.
% In this template package, it can be found in ./Latex/Classes/
\documentclass[twoside,11pt,table,xcdraw]{Latex/Classes/PhDthesisPSnPDF}

\usepackage[utf8]{inputenc}
\usepackage[english]{babel}
\usepackage{lipsum}  

%: Macro file for Latex
% Macros help you summarise frequently repeated Latex commands.
% Here, they are placed in an external file /Latex/Macros/MacroFile1.tex
% An macro that you may use frequently is the figuremacro (see introduction.tex)
%\include{Latex/Macros/MacroFile1}



%: ----------------------------------------------------------------------
%:                  TITLE PAGE: name, degree,..
% ----------------------------------------------------------------------
% below is to generate the title page with crest and author name

%if output to PDF then put the following in PDF header
\ifpdf  
    \pdfinfo { /Title 
               /Creator (TeX)
               /Producer (pdfTeX)
               /Author (David Chaves Fraga dchaves@fi.upm.es)
               /CreationDate (D:YYYYMMDDhhmmss)  %format D:YYYYMMDDhhmmss
               /ModDate (D:YYYYMMDDhhmm)
               /Subject (xyz)
               /Keywords () }
    \pdfcatalog { /PageMode (/UseOutlines)
                  /OpenAction (fitbh)  }
\fi

  
\title{Knowledge Graph Construction from Heterogeneous Data Sources Exploiting Declarative Mapping Rules}

% ----------------------------------------------------------------------
% The section below defines www links/email for author and institutions
% They will appear on the title page of the PDF and can be clicked
\ifpdf
 
  \author{{\hspace{7mm} David Chaves Fraga}}
  \supervisor{Oscar Corcho}
	%
	
%  \cityofbirth{born in XYZ} % uncomment this if your university requires this
%  % If city of birth is required, also uncomment 2 sections in PhDthesisPSnPDF
%  % Just search for the "city" and you'll find them.
%  \collegeordept{{Programa de Doctorado de Inteligencia Artificial \\ Facultad de Inform\'atica}}  
%  \university{\href{http://www.upm.es}{Universidad Polit\'ecnica de Madrid}}  
  % The crest is a graphics file of the logo of your research institution.
  % Place it in ./0_frontmatter/figures and specify the width
%  \crest{\includegraphics[width=3cm]{escudofi.pdf}}
\crest{  
		\centering
 		\begin{tabular}{l c}
			\multirow{3}{*}{\includegraphics[width=2cm]{0_frontmatter/figures/escudofi.pdf}} & \\
			& \textbf{Programa de Doctorado de Inteligencia Artificial} \\ 
			& \textbf{Escuela T\'ecnica Superior de Ingenieros Inform\'aticos} \\
		\end{tabular}
}
% If you are not creating a PDF then use the following. The default is PDF.
\else
  \author{YourName}
%  \cityofbirth{born in XYZ}
  \collegeordept{CollegeOrDept}
  \university{University}
  \crest{\includegraphics[width=4cm]{logo}}
\fi

%\renewcommand{\submittedtext}{change the default text here if needed}
\degree{Philosophi\ae Doctor (PhD), DPhil,..}
\degreedate{June, 2021}


% ----------------------------------------------------------------------
       
% turn of those nasty overfull and underfull hboxes
%\tolerance=1
%\emergencystretch=\maxdimen
%\hyphenpenalty=10000

\hbadness=10000
\hfuzz=50pt

\usepackage{enumitem}
\usepackage[table,xcdraw]{xcolor}
\usepackage{floatrow}
\usepackage{mathptmx}
\usepackage[T1]{fontenc}
\usepackage{textcomp}
\usepackage{listings}
\usepackage{tikz}
%\usepackage{paralist} 
\usepackage{import}

\usepackage{array}
\usepackage{color}
\usepackage{pgfplots}
\usepackage{amsmath}
\usepackage{xspace}
\usepackage{amssymb}
%\usepackage{enumerate}
%\usepackage{float}
%\usepackage{algpseudocode}
%\usepackage{algorithm}
\usepackage{verbatim}
\usepackage{multirow}
\usepackage{siunitx}
\usepackage{url}
\usepackage{chngcntr}
\usepackage{amsthm}
\usepackage{latexsym}
\usepackage{subfig}
\usepackage{pifont}
\usepackage{graphicx}
\usepackage{caption}
\usepackage{adjustbox} 
\usepackage{rotating}
%\usepackage{subcaption}
%\captionsetup{compatibility=false}
\usepackage{bibentry}
\usepackage{mathtools}
\usepackage{algorithm}
\usepackage{algorithmic}

\usepackage{ctable}

\usepackage[htt]{hyphenat}
\usetikzlibrary{patterns}
\counterwithout{footnote}{chapter}


%%<ALVARO>

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}




%%<IDAFEN>
\usepackage{xcolor}
\usepackage{color}
\definecolor{mygray}{rgb}{0.5,0.5,0.5}
\newcommand{\dfp}{dispel4py}

%\lstset{
%	basicstyle=\footnotesize,
%	breakatwhitespace=true,
%	breaklines=true,
%	numberstyle=\tiny\color{mygray},
%	numbers=left,
%	xleftmargin=1.5em,
%	frame=single,
%	framexleftmargin=1em,
%	frame=bt,
%}

%%subindex


\usepackage{multirow}

%%highlighting package
\usepackage{color}\newcommand{\mynote}[2][inline]{\color{red} [PENDING]: #2\color{black}}

%\newcommand{\mymark}[1]{\colorbox{orange}{#1}}
\newcommand{\mymark}[2][inline]{\color{orange}#2\color{black}}
\newcommand{\new}[2][inline]{\color{black}#2\color{black}}
\newcommand{\newtwo}[2][inline]{\color{black}#2\color{black}}
%\newcommand{\mynote}[2][inline]{\color{red} [PENDING]: #2\color{black}}
\usepackage{epigraph}
%%adding subsubsections
%\setcounter{secnumdepth}{3}

%%</IDAFEN>

\DeclareCaptionFormat{algor}{%
  \hrulefill\par\offinterlineskip\vskip1pt%
    \textbf{#1#2}#3\offinterlineskip\hrulefill}
\DeclareCaptionStyle{algori}{singlelinecheck=off,format=algor,labelsep=space}
%\captionsetup[algorithm]{style=algori}

\pdfoptionpdfminorversion 6

%% PIERRE

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    s1,every mark/.append style={fill=white},mark=*\\%
    s2,every mark/.append style={fill=white},mark=square*\\%
    s3,every mark/.append style={fill=white},mark=diamond*\\%
    s4,every mark/.append style={fill=white},mark=triangle*\\%
    s5,every mark/.append style={fill=white},mark=pentagon*\\%
    s6,every mark/.append style={fill=white},mark=otimes*\\%
}

\pgfplotsset{compat=1.11,
    /pgfplots/ybar legend/.style={
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        (0cm,0cm) rectangle (6.5pt,0.7em);},
   },
}

\pgfplotsset{
    grid=major,
    width=9cm,
    height=6cm,
    compat=1.9
}

\makeatletter
\g@addto@macro\@floatboxreset\centering
\makeatother

\pgfplotsset{plot coordinates/math parser=false}


\makeatletter
\pgfplotsset{
    groupplot xlabel/.initial={},
    every groupplot x label/.style={
        at={($({group c1r\pgfplots@group@rows.west}|-{group c1r\pgfplots@group@rows.outer south})!0.5!({group c\pgfplots@group@columns r\pgfplots@group@rows.east}|-{group c\pgfplots@group@columns r\pgfplots@group@rows.outer south})$)},
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}
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\def\endpgfplots@environment@groupplot{%
    \endpgfplots@environment@opt%
    \pgfkeys{/pgfplots/execute at end groupplot}%
    \endgroup%
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\makeatother

\definecolor{gray}{rgb}{0.95,0.95,0.95}

\usetikzlibrary{arrows, positioning, shapes.multipart, calc, fit, patterns, decorations.text,
decorations.pathreplacing, shapes.symbols}
\usepgfplotslibrary{groupplots}

%% Tables

\newcommand{\specialcell}[2][c]{%
  \begin{tabular}[#1]{@{}c@{}}#2\end{tabular}}
  
\newcolumntype{P}[1]{>{\centering\arraybackslash}p{#1}}
\newcolumntype{M}[1]{>{\centering\arraybackslash}m{#1}}
\newcolumntype{N}{@{}m{0pt}@{}}

%% Algo

\renewcommand{\algorithmicrequire}{\textbf{Input:}}
\renewcommand{\algorithmicensure}{\textbf{Output:}}
\let\oldReturn\Return
%\renewcommand{\Return}{\State\oldReturn}
%\renewcommand{\algorithmicforall}{\textbf{for each}}

%\algnewcommand{\LineComment}[1]{\State{\textit{\textcolor{black!60}{\(\triangleright\) #1}}}}

%% PGF

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\pgfdeclarelayer{mbg}
\pgfsetlayers{bg,mbg,main}

%% Sections

\newcommand{\lsection}[2]{
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    \label{sec:#1}
}

\newcommand{\lsubsection}[2]{
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    \label{sec:#1}
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    \label{sec:#1}
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\newcommand{\lsecref}[1]{\ref{sec:#1}}

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\makeatother
\addplot [forget plot,draw=none] coordinates{(1,0) (2,0) (3,0)};
}

%% /PIERRE

%: --------------------------------------------------------------
%:                  FRONT MATTER: dedications, abstract,..
% --------------------------------------------------------------

\begin{document}

%\language{english}

% sets line spacing
\renewcommand\baselinestretch{1.2}
\baselineskip=18pt plus1pt

\theoremstyle{plain}
\newtheorem{thm}{Theorem}[chapter] % reset theorem numbering for each chapter


\theoremstyle{definition}
\newtheorem{definition}[thm]{Definition} % definition numbers are dependent on theorem numbers

\newcommand{\attention}[1]{{\color{red}\textbf{#1}}}

\renewcommand\appendixname{ANNEX}


%: ----------------------- generate cover page ------------------------
\frontmatter
\maketitle  % command to print the title page with above variables


%: ----------------------- cover page back side ------------------------
% Your research institution may require reviewer names, etc.
% This cover back side is required by Dresden Med Fac; uncomment if needed.

% ALVARO: I'll have to change this

%\newpage
\pagestyle{plain}
\cleardoublepage
\pagestyle{plain}


\noindent Tribunal nombrado por el Sr. Rector Magfco. de la Universidad Polit\'{e}cnica de
Madrid, el d\'{i}a 9 de Junio de 2021. %\mynote{DD de YYYY de 2015}

\vspace{10mm}
Presidente:\hspace{0.3mm} Dr. Marcelo Arenas

\vspace{5mm}
Vocal: \hspace{6.7mm} Dr. Juan Sequeda 

\vspace{5mm}
Vocal: \hspace{6.7mm} Dra. Anastasia Dimou

\vspace{5mm}
Vocal: \hspace{6.7mm} Dr. Álvaro Sicilia Gómez 


\vspace{5mm}
Secretario:\hspace{0.67mm} Dr. Raúl García Castro

\vspace{5mm}
Suplente: \hspace{1.5mm} Dr. Mariano Fernández López   

\vspace{5mm}
Suplente: \hspace{1.5mm} Dr. Alberto Bugarín Díz

\vspace{10mm}
\noindent Realizado el acto de defensa y lectura de la Tesis el d\'{i}a 28 de Junio de 2021 en la Escuela T\'ecnica Superior de Ingenieros Inform\'aticos

\vspace{5mm}
\noindent Calificaci\'{o}n: \rule{123mm}{0.2mm}
\vspace{20mm}

EL PRESIDENTE \hspace{30mm} VOCAL 1 \hspace{30mm} VOCAL 2

\vspace{30mm}
%\begin{center}
\hspace{15mm} VOCAL 3 \hspace{45mm} EL SECRETARIO
%\end{center}




%: ----------------------- tie in front matter ------------------------

%\frontmatter
\cleardoublepage
\input{0_frontmatter/dedication}
\cleardoublepage
\input{0_frontmatter/acknowledgement}


%: ----------------------- abstract ------------------------

% Your institution may have specific regulations if you need an abstract and where it is to be placed in the document. The default here is just after title.
\cleardoublepage
\input{0_frontmatter/abstract}

% The original template provides and abstractseparate environment, if your institution requires them to be separate. I think it's easier to print the abstract from the complete thesis by restricting printing to the relevant page.
% \begin{abstractseparate}
%   \input{Abstract/abstract}
% \end{abstractseparate}


%: ----------------------- contents ------------------------
\cleardoublepage
\setcounter{secnumdepth}{3} % organisational level that receives a numbers
\setcounter{tocdepth}{2}    % print table of contents for level 3
\tableofcontents           % print the table of contents
% levels are: 0 - chapter, 1 - section, 2 - subsection, 3 - subsection


%: ----------------------- list of figures/tables ------------------------

\listoffigures	% print list of figures

\listoftables  % print list of tables

\listofalgorithms % Print list of algorithms


%: ----------------------- glossary ------------------------

% Tie in external source file for definitions: /0_frontmatter/glossary.tex
% Glossary entries can also be defined in the main text. See glossary.tex

%\include{0_frontmatter/glossary} 
%
%\begin{multicols}{2} % \begin{multicols}{#columns}[header text][space]
%\begin{footnotesize} % scriptsize(7) < footnotesize(8) < small (9) < normal (10)
%
%\printnomenclature[1.5cm] % [] = distance between entry and description
%\label{nom} % target name for links to glossary
%
%\end{footnotesize}
%\end{multicols}



%: --------------------------------------------------------------
%:                  MAIN DOCUMENT SECTION
% --------------------------------------------------------------

% the main text starts here with the introduction, 1st chapter,...
\mainmatter

%\renewcommand{\chaptername}{} % uncomment to print only "1" not "Chapter 1"
%\titleformat{\chapter}[display]{\normalfont\bfseries\}{\chaptertitlename\ \thechapter}{5pt}{\Huge}

%-#####-> Uncomment to have Andres' style for chapter title

%\titleformat{\chapter}[display]
%{\bfseries\Large}
%{\filleft\MakeUppercase{\chaptertitlename} \Huge\thechapter}
%{4ex}
%{\titlerule
%\vspace{2ex}%
%\filright}
%[\vspace{2ex}%
%\titlerule]

%-#####-> End uncomment


\input{1_introduction/introduction}

\input{2_stateoftheart/stateofart}

\input{3_objectives/objectives}

\input{4_mappingtranslation/translation}

\input{5_evaluation/evaluation}

\input{6_enhancingaccess/access}

\input{7_kgconstruction/construction}

\input{8_conclusions/conclusions}

\appendix
\include{appendix/appendix1}
\include{appendix/appendix2}
\include{appendix/appendix3}
\include{appendix/appendix02}
\include{appendix/appendix03}
\include{appendix/appendix04}






% --------------------------------------------------------------
%:                  BACK MATTER: appendices, refs,..
% --------------------------------------------------------------

% the back matter: appendix and references close the thesis


%\include{appendix/questions}
%\include{appendix/wicusontos}
%\include{appendix/annotations}
%\include{appendix/files}
%\include{appendix/terminology}

%: ----------------------- bibliography ------------------------

% The section below defines how references are listed and formatted
% The default below is 2 columns, small font, complete author names.
% Entries are also linked back to the page number in the text and to external URL if provided in the BibTex file.

% PhDbiblio-url2 = names small caps, title bold & hyperlinked, link to page 
%\begin{multicols}{2} % \begin{multicols}{ # columns}[ header text][ space]
%\begin{tiny} % tiny(5) < scriptsize(7) < footnotesize(8) < small (9)

%\bibliographystyle{Latex/Classes/PhDbiblio-case} % Title is link if provided
\bibliographystyle{Latex/Classes/jmb}
%\bibliographystyle{plainnat}
%\renewcommand{\bibname}{Bibliography} % changes the header; default: Bibliography
\bibliography{bibliography/bibliography} % adjust this to fit your BibTex file

%\end{tiny}
%\end{multicols}



% --------------------------------------------------------------
% Various bibliography styles exit. Replace above style as desired.

% in-text refs: (1) (1; 2)
% ref list: alphabetical; author(s) in small caps; initials last name; page(s)
%\bibliographystyle{Latex/Classes/PhDbiblio-case} % title forced lower case
%\bibliographystyle{Latex/Classes/PhDbiblio-bold} % title as in bibtex but bold
%\bibliographystyle{Latex/Classes/PhDbiblio-url} % bold + www link if provided

%\bibliographystyle{Latex/Classes/jmb} % calls style file jmb.bst
% in-text refs: author (year) without brackets
% ref list: alphabetical; author(s) in normal font; last name, initials; page(s)

%\bibliographystyle{plainnat} % calls style file plainnat.bst
% in-text refs: author (year) without brackets
% (this works with package natbib)


% --------------------------------------------------------------
 
% according to Dresden med fac summary has to be at the end
%\include{0_frontmatter/abstract}

%: Declaration of originality
%\include{12_bibliography/declaration}



\end{document}