-
Notifications
You must be signed in to change notification settings - Fork 1
/
metadata.yaml
182 lines (182 loc) · 5.94 KB
/
metadata.yaml
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
about:
- identifier: UBERON:0000955
name: Brain
schemaKey: Anatomy
- identifier: https://ontobee.org/ontology/NBO?iri=http://purl.obolibrary.org/obo/NBO_0000056
name: Walking Behavior
schemaKey: GenericType
- identifier: https://ontobee.org/ontology/NBO?iri=http://purl.obolibrary.org/obo/NBO_0000013
name: locomotory behavior
schemaKey: GenericType
- identifier: https://www.cognitiveatlas.org/concept/id/trm_50eb692db57eb/
name: locomotion
schemaKey: GenericType
- identifier: https://ontobee.org/ontology/NBO?iri=http://purl.obolibrary.org/obo/NBO_0000449
name: spontaneous movement behavior
schemaKey: GenericType
access:
- schemaKey: AccessRequirements
status: dandi:OpenAccess
assetsSummary:
approach:
- name: behavioral approach
schemaKey: ApproachType
- name: microscopy approach; cell population imaging
schemaKey: ApproachType
dataStandard:
- identifier: RRID:SCR_015242
name: Neurodata Without Borders (NWB)
schemaKey: StandardsType
measurementTechnique:
- name: two-photon microscopy technique
schemaKey: MeasurementTechniqueType
- name: analytical technique
schemaKey: MeasurementTechniqueType
- name: surgical technique
schemaKey: MeasurementTechniqueType
- name: behavioral technique
schemaKey: MeasurementTechniqueType
numberOfBytes: 609568504598
numberOfFiles: 18
numberOfSubjects: 9
schemaKey: AssetsSummary
species:
- identifier: http://purl.obolibrary.org/obo/NCBITaxon_7227
name: Drosophila melanogaster - Fruit fly
schemaKey: SpeciesType
variableMeasured:
- OpticalChannel
- ImagingPlane
- Position
- ProcessingModule
- TwoPhotonSeries
- SpatialSeries
citation: Brezovec, Luke; Berger, Andrew; Druckmann, Shaul ; Clandinin, Thomas (2024)
Mapping the Neural Dynamics of Locomotion across the Drosophila Brain (Version 0.240106.0043)
[Data set]. DANDI archive. https://doi.org/10.48324/dandi.000727/0.240106.0043
contributor:
- affiliation: []
identifier: 0000-0001-9341-3565
includeInCitation: true
name: Brezovec, Luke
roleName:
- dcite:Author
- dcite:Researcher
- dcite:Software
- dcite:Visualization
- dcite:ContactPerson
- dcite:Conceptualization
- dcite:DataCollector
schemaKey: Person
- affiliation: []
identifier: 0000-0003-4880-1264
includeInCitation: true
name: Berger, Andrew
roleName:
- dcite:Author
- dcite:DataManager
- dcite:Software
schemaKey: Person
- affiliation: []
identifier: 0000-0003-0068-3377
includeInCitation: true
name: 'Druckmann, Shaul '
roleName:
- dcite:Author
- dcite:FormalAnalysis
- dcite:Researcher
schemaKey: Person
- affiliation: []
email: trc@stanford.edu
identifier: 0000-0001-6277-6849
includeInCitation: true
name: Clandinin, Thomas
roleName:
- dcite:Author
- dcite:Supervision
- dcite:FundingAcquisition
- dcite:ContactPerson
- dcite:Conceptualization
schemaKey: Person
url: http://clandininlab.stanford.edu/
- awardNumber: R01EY022628,5U19NS104655,3R01NS11006003,5P30EY02687704
contactPoint: []
identifier: https://ror.org/01cwqze88
includeInCitation: false
name: National Institutes of Health
roleName:
- dcite:Funder
schemaKey: Organization
url: http://www.nih.gov/
- contactPoint: []
identifier: https://ror.org/01cmst727
includeInCitation: false
name: Simons Foundation
roleName:
- dcite:Funder
schemaKey: Organization
url: https://www.simonsfoundation.org
- affiliation: []
includeInCitation: false
name: Mayorquin, Heberto
roleName:
- dcite:DataCurator
schemaKey: Person
- affiliation: []
includeInCitation: false
name: Trapani, Alessandra
roleName:
- dcite:DataCurator
schemaKey: Person
dateCreated: '2023-12-10T10:22:46.518636+00:00'
datePublished: '2024-01-06T00:43:26.650046+00:00'
description: Walking is a fundamental mode of locomotion, yet its neural correlates
are unknown at brain-wide scale in any animal. We use volumetric two-photon imaging
to map neural activity associated with walking across the entire brain of Drosophila.
We detect locomotor signals in approximately 40% of the brain, identify a global
signal associated with the transition from rest to walking, and define clustered
neural signals selectively associated with changes in forward or angular velocity.
These networks span functionally diverse brain regions, and include regions that
have not been previously linked to locomotion. We also identify time-varying trajectories
of neural activity that anticipate future movements, and that represent sequential
engagement of clusters of neurons with different behavioral selectivity. These motor
maps suggest a dynamical systems framework for constructing walking maneuvers reminiscent
of models of forelimb reaching in primates and set a foundation for understanding
how local circuits interact across large-scale networks.
doi: 10.48324/dandi.000727/0.240106.0043
ethicsApproval: []
id: DANDI:000727/0.240106.0043
identifier: DANDI:000727
keywords: []
license:
- spdx:CC-BY-4.0
manifestLocation:
- https://dandiarchive.s3.amazonaws.com/dandisets/000727/0.240106.0043/assets.yaml
name: Mapping the Neural Dynamics of Locomotion across the Drosophila Brain
protocol: []
publishedBy:
endDate: '2024-01-06T00:43:26.650046+00:00'
id: urn:uuid:166bb09c-72ba-4c3c-9ade-164979af9f96
name: DANDI publish
schemaKey: PublishActivity
startDate: '2024-01-06T00:43:26.650046+00:00'
wasAssociatedWith:
- id: urn:uuid:90bbb298-c695-47eb-86f2-01ca9610d443
identifier: RRID:SCR_017571
name: DANDI API
schemaKey: Software
version: 0.1.0
relatedResource:
- identifier: https://doi.org/10.1101/2022.03.20.485047
name: Mapping the Neural Dynamics of Locomotion across the Drosophila Brain
relation: dcite:IsDescribedBy
repository: bioRxiv
schemaKey: Resource
url: https://doi.org/10.1101/2022.03.20.485047
repository: https://dandiarchive.org
schemaKey: Dandiset
schemaVersion: 0.6.4
studyTarget: []
url: https://dandiarchive.org/dandiset/000727/0.240106.0043
version: 0.240106.0043
wasGeneratedBy: []