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dataset_description.json
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dataset_description.json
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{
"Name": "Human brain cell census for BA 44/45",
"Description": "Magnetic resonance imaging (MRI) is used to establish a macroscopic reference coordinate system of laminar and cytoarchitectural boundaries. Cell counting is obtained with both traditional immunohistochemistry, to provide a stereological gold standard, and with a custom-made inverted confocal light-sheet fluorescence microscope (LSM) for 3D imaging at cellular resolution. Finally, polarization-sensitive optical coherence tomography (PSOCT) enables registration of the distorted histological cell typing obtained with LSM to the MRI-based atlas coordinate system.",
"BIDSVersion": "1.0",
"DatasetType": "raw",
"License": "CC-BY-4.0",
"Authors": "Mazzamuto, Giacomo; Costantini, Irene; Gavryusev, Vladislav; Castelli, Filippo Maria; Pesce, Luca; Scardigli, Marina; Pavone, Francesco Saverio; Roffilli, Matteo; Silvestri, Ludovico; Hof, Patrick R.; Boas, David A.; Fischl, Bruce; Morgan, Leah; Yang, Jiarui; Chang, Shuaibin; Laffey, Jessie; Magnain, Caroline; Varadarajan, Divya; Wang, Hui; Frost, Robert; Kouwe, Andre van der; Player, Allison Stevens; Atzeni, Alessia; Gonzalez, Juan Eugenio Iglesias; Balbastre, Yael; Vera, Matthew; Cordero, Devani; Nestor, Kimberly; Ammon, William; Nolan, Jackson; Mora, Jocelyn; Pallares, Erendira Garcia; Augustinack, Jean; Diamond, Bram; Fogarty, Morgan; Boyd, Emma; Varghese, Merina; Dalca, Adrian V.; Edlow, Brian; Frosche, Matthew; Chen, I-Chun Anderson; Wicinski, Bridget ",
"HowToAcknowledge": "Mazzamuto, Giacomo; Costantini, Irene; Gavryusev, Vladislav; Castelli, Filippo Maria; Pesce, Luca; Scardigli, Marina; Pavone, Francesco Saverio; Roffilli, Matteo; Silvestri, Ludovico; Hof, Patrick R.; Boas, David A.; Fischl, Bruce; Morgan, Leah; Yang, Jiarui; Chang, Shuaibin; Laffey, Jessie; Magnain, Caroline; Varadarajan, Divya; Wang, Hui; Frost, Robert; Kouwe, Andre van der; Player, Allison Stevens; Atzeni, Alessia; Gonzalez, Juan Eugenio Iglesias; Balbastre, Yael; Vera, Matthew; Cordero, Devani; Nestor, Kimberly; Ammon, William; Nolan, Jackson; Mora, Jocelyn; Pallares, Erendira Garcia; Augustinack, Jean; Diamond, Bram; Fogarty, Morgan; Boyd, Emma; Varghese, Merina; Dalca, Adrian V.; Edlow, Brian; Frosche, Matthew; Chen, I-Chun Anderson; Wicinski, Bridget (2021) Human brain cell census for BA 44/45 (Version draft) [Data set]. DANDI archive. https://dandiarchive.org/dandiset/000026/draft",
"Acknowledgements": "Allen Institute for Brain Science & the Brain Initiative, DANDI",
"Funding": "National Institute of Mental Health:1U01MH117023",
"ReferencesAndLinks": "https://www.spiedigitallibrary.org/journals/journal-of-biomedical-optics/volume-24/issue-10/106504/Dual-beam-confocal-light-sheet-microscopy-via-flexible-acousto-optic/10.1117/1.JBO.24.10.106504.full?tab=ArticleLinkCited, https://www.biorxiv.org/content/10.1101/2020.07.28.225011v1, https://www.biorxiv.org/content/10.1101/2020.08.06.219444v1, https://pubmed.ncbi.nlm.nih.gov/33094126/,https://pubmed.ncbi.nlm.nih.gov/29017866/, https://www.spiedigitallibrary.org/conference-proceedings-of-spie/11629/116291J/Measuring-myelin-content-and-cell-density-in-the-human-brain/10.1117/12.2578489.short, https://www.biorxiv.org/content/10.1101/2020.10.27.357186v1, https://www.biorxiv.org/content/10.1101/2020.10.07.329227v1",
"DatasetDOI": "https://dandiarchive.org/dandiset/000026/draft"
}