Stand-alone notebook to reproduce plots in Figure 1 & 2 on directional startle behavior. For a quick preview, open the notebook on github.
You can execute the notebook on a free runtime hosted by Google Research (click "Open in Colab")
- There are no specific hadware requirements. This software should run on Windows, Linux and Mac.
- Install conda for Python 3.x
- Change to the directory containing this file
- Execute the collowing lines
conda create -n veith2024 'python>=3.8' 'numpy<2' scipy pandas matplotlib ipympl jupyter -c conda-forge
conda activate veith2024
jupyter notebook generate_figures_1_2.ipynb
Above steps typically take 10-15 mins.
Alternatively, open the notebook in your own Jupyter Notebook environment after installing numpy<2, scipy, pandas and matplotlib modules.
The data is available under https://gin.g-node.org/danionella/Veith_et_al_2024/src/master/behavior