A collection of completed bioinformatics exercises from the Rosalind project and "Bioinformatics Algorithms: an Active Learning Approach" textbook by Phillip Compeau and Pavel Pevzner
Latest versions of Python 3 and pip
Run pip install to install requirements from the requirements.txt file
Solutions can be executed like
python textbook/src/ba1b.py textbook/data/ba1b.txt textbook/output/ba1b.txt
python stronghold/src/ex_13__overlap_graphs.py stronghold/data/ex_13.txt stronghold/output/ex_13.txt
- John DiBaggio