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Improve Command line options #3

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CDieterich opened this issue Nov 13, 2015 · 0 comments
Open

Improve Command line options #3

CDieterich opened this issue Nov 13, 2015 · 0 comments
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@tjakobi
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development enhancement
Milestone
DCC version 0.5

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@CDieterich
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The current command line options of DCC are numerous, difficult to understand and partially redundant.
I would suggest to clean up and orient yourself at tools such as cufflinks

  • one sample sheet (for all files, three columns)

label type filepath

  • reduce option for strandedness to single multiple choice option

feel free to improve more options
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@tjakobi tjakobi

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development enhancement
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DCC version 0.5
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@tjakobi @s6juncheng @CDieterich