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No strand info in circRNACounts when using -F filter #59

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egaffo opened this issue Dec 23, 2018 · 1 comment
Open

No strand info in circRNACounts when using -F filter #59

egaffo opened this issue Dec 23, 2018 · 1 comment
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@egaffo
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egaffo commented Dec 23, 2018

I'm using DCC v0.4.6 and I saw that when setting the -F filter the strand info is no longer specified in the circRNACount result file. I run on one sample.

@tjakobi tjakobi self-assigned this Jan 2, 2019
@daaaaande
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see the same here
all other option set to default , paired end mode, hg38
-F -Pi -M -Nr 2 1
if the -F flag is removed in this case, the strand re-appears in the output files.
This did not happen before version 0.4.6 AFAIK

@tjakobi tjakobi added the bug label Sep 19, 2019
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