enh: xenium convenience function updates #1064
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jiajic
commented
Nov 7, 2024
jiajic
commented
- auto .ome image conversion on first load
- image directory loading
- specific image naming for morphology focus images
- specific renaming for known 10x probe types expression information to match transcript feat_type defaults
- auto generate centroids/spatlocs for loaded polygon data
- ability to skip transcript loading
Giotto 4.1.3
Giotto 4.1.4 - hotix visium spot polygon sizing
This reverts commit f41142b.
- make transcript loading optional in create_gobject - change featmeta loading to after possible expr matrix loading - silence verbosity when loading TX cols
- autoload focus images - auto load pre-agg data + metadata - skip tx by default
This reverts commit 8b0950f.
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