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Hi,
Dynverse is a powerful tool to infer and evaluate trajectories for single-cell RNA sequencing data. Several days ago, I met a tough problem under Ubuntu18.04 when inferring trajectories. The version of ti_slingshot is 1.0.3.
The codes are below:
Hi,
Dynverse is a powerful tool to infer and evaluate trajectories for single-cell RNA sequencing data. Several days ago, I met a tough problem under Ubuntu18.04 when inferring trajectories. The version of ti_slingshot is 1.0.3.
The codes are below:
The error said:
However, the dataset path parameter is actually in the recording infomation.
Then, I tried these codes on Windows10 and everything is OK:
The R environment under Ubuntu is below:
I guess that this error is generated by
fix_windows_path()
function in the original codes because the change of path may not be valid under Linux OS.Could you please find out the reason and solve this problem?
Thanks very much!
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