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DNAnexus Uranus workflow to support the Haem-Onc myeloid project

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eastgenomics/eggd_uranus_main_workflow

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eggd_uranus_workflow (DNAnexus Platform Workflow)

DNAnexus Uranus workflow to support the Haem-Onc myeloid service


Image of workflow

What apps are used in this workflow?

App Version
sentieon-bwa 3.2.0
sentieon-tnbam 3.2.0
cgppindel 1.2.0
verifybamid 2.2.1
picardqc 1.1.0
samtools_flagstat 1.1.0
mosdepth 1.1.0
athena 1.4.0
somalier_extract 1.1.0
sompy 1.0.4
eggd_apheleia 1.0.1
eggd_vep 1.3.0
eggd_vcf_rescue 1.2.0
eggd_generate_variant_workbook 2.9.0