diff --git a/easybuild/easyconfigs/m/medaka/medaka-1.4.3-foss-2020b.eb b/easybuild/easyconfigs/m/medaka/medaka-1.4.3-foss-2020b.eb index 6619e4a1e9b..a6ccdd55057 100644 --- a/easybuild/easyconfigs/m/medaka/medaka-1.4.3-foss-2020b.eb +++ b/easybuild/easyconfigs/m/medaka/medaka-1.4.3-foss-2020b.eb @@ -36,6 +36,7 @@ dependencies = [ ('pyspoa', '0.0.8'), ('pyfaidx', '0.5.9.5'), ('python-isal', '0.11.1'), + ('BCFtools', '1.11'), ] use_pip = True @@ -83,10 +84,13 @@ exts_list = [ sanity_pip_check = True sanity_check_paths = { - 'files': ['bin/medaka', 'bin/medaka_consensus'], + 'files': ['bin/medaka', 'bin/medaka_consensus', 'bin/medaka_version_report'], 'dirs': ['lib/python%(pyshortver)s/site-packages'], } -sanity_check_commands = ["medaka --help"] +sanity_check_commands = [ + "medaka --help", + "medaka_version_report", +] moduleclass = 'bio' diff --git a/easybuild/easyconfigs/m/medaka/medaka-1.5.0-foss-2021a.eb b/easybuild/easyconfigs/m/medaka/medaka-1.5.0-foss-2021a.eb index d3f817945e5..75466141935 100644 --- a/easybuild/easyconfigs/m/medaka/medaka-1.5.0-foss-2021a.eb +++ b/easybuild/easyconfigs/m/medaka/medaka-1.5.0-foss-2021a.eb @@ -35,6 +35,7 @@ dependencies = [ ('ont-fast5-api', '4.0.0'), ('WhatsHap', '1.1'), ('intervaltree-python', '3.1.0'), + ('BCFtools', '1.12'), ] use_pip = True @@ -51,10 +52,13 @@ exts_list = [ sanity_pip_check = True sanity_check_paths = { - 'files': ['bin/medaka', 'bin/medaka_consensus'], + 'files': ['bin/medaka', 'bin/medaka_consensus', 'bin/medaka_version_report'], 'dirs': ['lib/python%(pyshortver)s/site-packages'], } -sanity_check_commands = ["medaka --help"] +sanity_check_commands = [ + "medaka --help", + "medaka_version_report", +] moduleclass = 'bio' diff --git a/easybuild/easyconfigs/m/medaka/medaka-1.6.0-foss-2021b.eb b/easybuild/easyconfigs/m/medaka/medaka-1.6.0-foss-2021b.eb index 4b426e05a0a..f13a44b0e6e 100644 --- a/easybuild/easyconfigs/m/medaka/medaka-1.6.0-foss-2021b.eb +++ b/easybuild/easyconfigs/m/medaka/medaka-1.6.0-foss-2021b.eb @@ -36,6 +36,7 @@ dependencies = [ ('ont-fast5-api', '4.0.2'), ('WhatsHap', '1.4'), ('intervaltree-python', '3.1.0'), + ('BCFtools', '1.14'), ] use_pip = True @@ -52,10 +53,13 @@ exts_list = [ sanity_pip_check = True sanity_check_paths = { - 'files': ['bin/medaka', 'bin/medaka_consensus'], + 'files': ['bin/medaka', 'bin/medaka_consensus', 'bin/medaka_version_report'], 'dirs': ['lib/python%(pyshortver)s/site-packages'], } -sanity_check_commands = ["medaka --help"] +sanity_check_commands = [ + "medaka --help", + "medaka_version_report", +] moduleclass = 'bio'