DESCRIPTION

Package: scShaper
Type: Package
Title: A tool for linear trajectory inference from single-cell RNA-seq data through discrete pseudotime estimation using Shortest HAmiltonian path PERmuted clustering
Version: 0.1.0
Author: Johannes Smolander
Maintainer: Johannes Smolander <johannes.smolander@gmail.com>
Description: scShaper is a tool linear trajectory inference. The tool has been primarily designed for scRNA-seq data.
Authors@R: c(person("Johannes", "Smolander",
             email = "johannes.smolander@gmail.com",
             role=c("cre", "aut")),
             person("Sini", "Junttila",
             role=c("aut")),
             person("Mikko S", "Venäläinen",
             role=c("aut")),
             person("Laura L", "Elo",
             role=c("aut")))
License: GPL-3
Imports: Matrix,Rtsne, plyr, dplyr, 
          SingleCellExperiment, SummarizedExperiment, S4Vectors, methods, stats,
          utils
Depends: R(>= 4.0.0)
LinkingTo: Rcpp
LazyData: TRUE
RoxygenNote: 7.1.0
Encoding: UTF-8
Suggests: knitr, rmarkdown
VignetteBuilder: knitr
NeedsCompilation: no
URL: https://github.com/elolab/scshaper
BugReports: https://github.com/elolab/scshaper