v2.1.5

Fixed

• Capitalised modified base tags additionally removed from monomers if no modified bases for a monomer.

v2.1.4

Fixed

• MN tag is now amended when monomer records are created.

Added

• All potential minimap2 SAM tags are removed from input records before processing.

v2.1.3

Changed

• ML tag is now correctly a byte array tag.

v2.1.2

Added

• Full example to README.

Changed

• The command-line option --stdout now behaves as a more traditional boolean
  option.

Fixed

• A regression whereby mv tag in BAM was not being dropped.

v2.1.1

Changed

• Updated requirements of conda package.

v2.1.0

Added

• Option max_monomers to digest command to remove reads containing more
  than max monomers. Excluded reads can be output to second BAM file and/or
  a text file of read names.

Removed

• --max_reads argument from digest command, as it was non-functional.

v2.0.6

Fixed

• Chromunity parquet file output contains columns required for use with Chromunity.

v2.0.5

Changed

• Updated LICENSE to Oxford Nanopore Technologies PLC. Public License Version 1.0.

v2.0.4

Fixed

• Chromunity writer group colinear output error.
• Modified bases digest step and associated tests.

v2.0.3

Added

• Digest sub command will accept stdin input.