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🐛 Bug: Fetching models from_dir #1532
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Hi @arnaucoma24 thanks for creating issue. This problem is related to bentoml dependency. We are creating a fix for this currently. To quickly solve this you can do the following on ersilia pip uninstall bentoml The just continue the fetching again. |
Thanks @Abellegese for being on top of this. Is that the source of the problem? And is it an issue that only happens when installing Ersilia in a new system? |
Hi @GemmaTuron so I highly suspect that this problem is, what we call it module shadow. Let me explain. We have a file called in ersilia
So @OlawumiSalaam I think has this fix in her PR, will see that and fix this once and for all. |
Great thanks for the explanation I think I get it! @OlawumiSalaam anything you want to add here? |
Hi @GemmaTuron |
amazing thanks @OlawumiSalaam for the detailed feedback |
I can confirm |
Hi @arnaucoma24 glad it works. Will let you know the ultimate fix for this issue. |
Describe the bug.
Hi all!
After cloning a model repository to a local directory (eos4wt0 to
/aloy/home/acomajuncosa/Ersilia/models/eos4wt0
), I am trying to fetch it viaersilia -v fetch eos4wt0 --from_dir /aloy/home/acomajuncosa/Ersilia/models/eos4wt0
(ersilia, version 0.1.41, python 3.10) and I encounter this issue (see below). Is there something I'm doing wrong? The file/home/acomajuncosa/eos/current.log
seems to be empty.Additionally, I tried to clone & fetched other models -all of them seem to give a similar (but not identical) JSONDecodeError. Let me know if you want to check more logs.
Describe the steps to reproduce the behavior
No response
Operating environment
Ubuntu 20.04 3 LTS
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