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Hi,
It seems that the bowtie1 log has been changed in the latest version (>1.3.0)
# reads processed: 16515809
# reads with at least one alignment: 1070136 (6.48%)
# reads that failed to align: 15445673 (93.52%)
# reads with alignments suppressed due to -m: 1531 (0.01%)
The number of aligned reads is defined in the module as
"reads_aligned": r"# reads with at least one reported alignment:\s+(\d+)",
"reads_aligned_percentage": r"# reads with at least one reported alignment:\s+\d+\s+\(([\d\.]+)%\)",
and so is no longer recognized by MultiQC.
Thanks
File that triggers the error
No response
MultiQC Error log
No response
The text was updated successfully, but these errors were encountered:
Description of bug
Hi,
It seems that the bowtie1 log has been changed in the latest version (>1.3.0)
The number of aligned reads is defined in the module as
and so is no longer recognized by MultiQC.
Thanks
File that triggers the error
No response
MultiQC Error log
No response
The text was updated successfully, but these errors were encountered: