FlashR is an R package that accelerate the existing R matrix functions to process tera-scale datasets at the lightning speed. FlashR overrides many R matrix functions in the R "base" package so that users can execute many existing R code in FlashR with no or little modification. FlashR parallelizes all matrix operations automatically and scales to large datasets by storing matrices on solid-state drives (SSDs). It executes many matrix operations together to achieve performance comparable to optimized C implementations.
To install from Github directly,
git clone --recursive https://github.com/flashxio/FlashR.git
cd FlashR
R CMD build .
R CMD INSTALL FlashR_0.1-0.tar.gz
To install from the tar file directly,
R -e "install.packages("https://github.com/flashxio/FlashR/releases/download/FlashR-latest/FlashR.tar.gz", repos=NULL)"
However, the tar file may contain a less up-to-date version.
Note: FlashR relies on some Linux and R packages. Please follow the instructions here for more details of installing FlashR.
The programming tutorial shows all of the features in FlashR.
Please visit http://flashx.io/ for more documentation.