From cbb051f613da6f69bd024504e07b80b3f62b1e6f Mon Sep 17 00:00:00 2001 From: florianhartig Date: Wed, 7 Apr 2021 22:55:47 +0200 Subject: [PATCH] updates 4.0 --- DESCRIPTION | 50 ----------------------------------------- DHARMa/DESCRIPTION | 1 - DHARMa/cran-comments.md | 23 +++++++++++++++++++ 3 files changed, 23 insertions(+), 51 deletions(-) delete mode 100644 DESCRIPTION diff --git a/DESCRIPTION b/DESCRIPTION deleted file mode 100644 index db3eaeef..00000000 --- a/DESCRIPTION +++ /dev/null @@ -1,50 +0,0 @@ -Package: DHARMa -Title: Residual Diagnostics for Hierarchical (Multi-Level / Mixed) Regression Models -Version: 0.3.3.1 -Date: 2020-08-22 -Authors@R: c(person("Florian", "Hartig", email = "florian.hartig@biologie.uni-regensburg.de", role = c("aut", "cre"), comment=c(ORCID="0000-0002-6255-9059")), person("Lukas", "Lohse", role = "ctb")) -Description: The 'DHARMa' package uses a simulation-based approach to create - readily interpretable scaled (quantile) residuals for fitted (generalized) linear mixed - models. Currently supported are linear and generalized linear (mixed) models from 'lme4' - (classes 'lmerMod', 'glmerMod'), 'glmmTMB' 'GLMMadaptive' and 'spaMM', generalized additive models - ('gam' from 'mgcv'), 'glm' (including 'negbin' from 'MASS', but excluding quasi-distributions) and - 'lm' model classes. Moreover, externally created simulations, e.g. posterior predictive simulations - from Bayesian software such as 'JAGS', 'STAN', or 'BUGS' can be processed as well. - The resulting residuals are standardized to values between 0 and 1 and can be interpreted - as intuitively as residuals from a linear regression. The package also provides a number of - plot and test functions for typical model misspecification problems, such as - over/underdispersion, zero-inflation, and residual spatial and temporal autocorrelation. -Depends: - R (>= 3.0.2) -Imports: - stats, - graphics, - utils, - grDevices, - parallel, - doParallel, - foreach, - gap, - lmtest, - ape, - qgam (>= 1.3.2), - lme4 -Suggests: - knitr, - testthat, - rmarkdown, - KernSmooth, - sfsmisc, - MASS, - mgcv, - glmmTMB (>= 1.0.1), - spaMM (>= 3.2.0), - GLMMadaptive -License: GPL (>= 3) -URL: http://florianhartig.github.io/DHARMa/ -BugReports: https://github.com/florianhartig/DHARMa/issues -LazyData: true -RoxygenNote: 7.1.1 -Roxygen: list(old_usage = TRUE) -VignetteBuilder: knitr -Encoding: UTF-8 diff --git a/DHARMa/DESCRIPTION b/DHARMa/DESCRIPTION index dde16d5c..6f66d8c7 100644 --- a/DHARMa/DESCRIPTION +++ b/DHARMa/DESCRIPTION @@ -43,7 +43,6 @@ Suggests: License: GPL (>= 3) URL: http://florianhartig.github.io/DHARMa/ BugReports: https://github.com/florianhartig/DHARMa/issues -LazyData: true RoxygenNote: 7.1.1 Roxygen: list(old_usage = TRUE) VignetteBuilder: knitr diff --git a/DHARMa/cran-comments.md b/DHARMa/cran-comments.md index 358dde94..757f677a 100644 --- a/DHARMa/cran-comments.md +++ b/DHARMa/cran-comments.md @@ -10,6 +10,29 @@ This release was tested without apparent problems under * http://win-builder.r-project.org/ - oldrelease / devel / release * Linux (Travis CI) - oldrel / release / devel +## Submission 2, 27.3.2021 + +This is a bugfix release for 0.3.4, but on reflection I decided that 0.4.0 should have been a minor release, so I pushed the version number up to 0.4.0 + +This release was tested without apparent problems under + +* local MAC OS 10.16 (Big Sur), R 3.6.1 +* http://win-builder.r-project.org/ - oldrelease / devel / release +* Linux (Travis CI) - oldrel / release / devel + +Notes: this is the second submission, pre-submission checks from earlier version complained about lazy data in the descriptin, which I have removed, although I don't see the problem to set lazy data even if there is no data in the package, it's just my default description setting for packages. + +## Submission 3, 27.3.2021 + +This is a bugfix release for 0.3.4, but on reflection I decided that 0.4.0 should have been a minor release, so I pushed the version number up to 0.4.0 + +This release was tested without apparent problems under + +* local MAC OS 10.16 (Big Sur), R 3.6.1 +* http://win-builder.r-project.org/ - oldrelease / devel / release +* Linux (Travis CI) - oldrel / release / devel + +Notes: this is the third submission, pre-submission checks from earlier version complained about lazy data in the descriptin, which I have now really removed. # Version 0.3.4