------------------------+------------------------------------------------------ %%% SIMULATION MENU %%% : Start YYYYMMDD, hhmmss : 20190701 000000 End YYYYMMDD, hhmmss : 20190801 000000 Run directory : ./ Root data directory : /projects/horowitz_group/GEOSChem_input_data/ExtData Met field : GEOSFP Simulation name : fullchem Species database file : ./species_database.yml Turn on debug printout? : F Use GC classic timers? : F ------------------------+------------------------------------------------------ %%% GRID MENU %%% : Grid resolution : 0.25x0.3125 Longitude min/max : -130.0 -60.0 Latitude min/max : 9.75 60.0 Half-sized polar boxes?: F Number of levels : 47 Nested grid simulation? : T Buffer zone (N S E W ) : 3 3 3 3 ------------------------+------------------------------------------------------ %%% TIMESTEP MENU %%% : Tran/conv timestep [sec]: 300 Chem/emis timestep [sec]: 600 ------------------------+------------------------------------------------------ %%% ADVECTED SPECIES MENU %%%: Species name : ACET Species name : ACTA Species name : AERI Species name : ALD2 Species name : ALK4 Species name : ATOOH Species name : BCPI Species name : BCPO Species name : BENZ Species name : Br Species name : Br2 Species name : BrCl Species name : BrNO2 Species name : BrNO3 Species name : BrO Species name : BrSALA Species name : BrSALC Species name : C2H6 Species name : C3H8 Species name : CCl4 Species name : CFC11 Species name : CFC113 Species name : CFC114 Species name : CFC115 Species name : CFC12 Species name : CH2Br2 Species name : CH2Cl2 Species name : CH2I2 Species name : CH2IBr Species name : CH2ICl Species name : CH2O Species name : CH3Br Species name : CH3CCl3 Species name : CH3Cl Species name : CH3I Species name : CH4 Species name : CHBr3 Species name : CHCl3 Species name : Cl Species name : Cl2 Species name : Cl2O2 Species name : ClNO2 Species name : ClNO3 Species name : ClO Species name : ClOO Species name : CLOCK Species name : CO Species name : DMS Species name : DST1 Species name : DST2 Species name : DST3 Species name : DST4 Species name : EOH Species name : ETHLN Species name : ETNO3 Species name : ETP Species name : GLYC Species name : GLYX Species name : H1211 Species name : H1301 Species name : H2402 Species name : H2O Species name : H2O2 Species name : HAC Species name : HBr Species name : HC5A Species name : HCFC123 Species name : HCFC141b Species name : HCFC142b Species name : HCFC22 Species name : HCl Species name : HCOOH Species name : HI Species name : HMHP Species name : HMML Species name : HNO2 Species name : HNO3 Species name : HNO4 Species name : HOBr Species name : HOCl Species name : HOI Species name : HONIT Species name : HPALD1 Species name : HPALD2 Species name : HPALD3 Species name : HPALD4 Species name : HPETHNL Species name : I Species name : I2 Species name : I2O2 Species name : I2O3 Species name : I2O4 Species name : IBr Species name : ICHE Species name : ICl Species name : ICN Species name : ICPDH Species name : IDC Species name : IDCHP Species name : IDHDP Species name : IDHPE Species name : IDN Species name : IEPOXA Species name : IEPOXB Species name : IEPOXD Species name : IHN1 Species name : IHN2 Species name : IHN3 Species name : IHN4 Species name : INDIOL Species name : INO Species name : INPB Species name : INPD Species name : IO Species name : IONITA Species name : IONO Species name : IONO2 Species name : IPRNO3 Species name : ISALA Species name : ISALC Species name : ISOP Species name : ITCN Species name : ITHN Species name : LIMO Species name : LVOC Species name : LVOCOA Species name : MACR Species name : MACR1OOH Species name : MAP Species name : MCRDH Species name : MCRENOL Species name : MCRHN Species name : MCRHNB Species name : MCRHP Species name : MEK Species name : MENO3 Species name : MGLY Species name : MOH Species name : MONITA Species name : MONITS Species name : MONITU Species name : MP Species name : MPAN Species name : MPN Species name : MSA Species name : MTPA Species name : MTPO Species name : MVK Species name : MVKDH Species name : MVKHC Species name : MVKHCB Species name : MVKHP Species name : MVKN Species name : MVKPC Species name : N2O Species name : N2O5 Species name : NH3 Species name : NH4 Species name : NIT Species name : NITs Species name : NO Species name : NO2 Species name : NO3 Species name : NPRNO3 Species name : O3 Species name : OClO Species name : OCPI Species name : OCPO Species name : OCS Species name : OIO Species name : PAN Species name : pFe Species name : PIP Species name : PP Species name : PPN Species name : PROPNN Species name : PRPE Species name : PRPN Species name : PYAC Species name : R4N2 Species name : R4P Species name : RA3P Species name : RB3P Species name : RCHO Species name : RIPA Species name : RIPB Species name : RIPC Species name : RIPD Species name : RP Species name : SALA Species name : SALAAL Species name : SALACL Species name : SALC Species name : SALCAL Species name : SALCCL Species name : SO2 Species name : SO4 Species name : SO4s Species name : SOAGX Species name : SOAIE Species name : SOAP Species name : SOAS Species name : TOLU Species name : XYLE ------------------------+------------------------------------------------------ %%% TRANSPORT MENU %%% : Turn on Transport : T => Fill Negative Values: T => IORD, JORD, KORD : 3 3 7 ------------------------+------------------------------------------------------ %%% CONVECTION MENU %%% : Turn on Cloud Conv? : T Turn on PBL Mixing? : T => Use non-local PBL? : T ------------------------+------------------------------------------------------ %%% AEROSOL MENU %%% : Online SULFATE AEROSOLS : T => Metal cat. SO2 ox.? : T Online CARBON AEROSOLS : T => Use Brown Carbon? : F Online COMPLEX SOA : F => Semivolatile POA? : F Online DUST AEROSOLS : T => Acidic uptake ? : F Online SEASALT AEROSOLS : T => SALA radius bin [um]: 0.01 0.5 => SALC radius bin [um]: 0.5 8.0 => MARINE ORG AEROSOLS : F Settle strat. aerosols : T Online PSC AEROSOLS : T Allow homogeneous NAT? : F NAT supercooling req.(K): 3.0 Ice supersaturation req.: 1.2 Perform PSC het. chem.? : T Calc. strat. aero. OD? : T Enhance BC Absorption? : T => hydrophilic BC : 1.5 => hydrophobic BC : 1.0 Photolyse nitrate aer.? : F => NITs Jscale (JHNO3) : 0.0 => NIT Jscale (JHNO3) : 0.0 => % channel A (HONO) : 66.667 => % channel B (NO2) : 33.333 ------------------------+------------------------------------------------------ %%% DEPOSITION MENU %%% : Turn on Dry Deposition? : T Turn on Wet Deposition? : T Turn on CO2 Effect? : F CO2 level : 600.0 Reference CO2 level : 380.0 Diag alt above sfc [m] : 10 ------------------------+------------------------------------------------------ %%% CHEMISTRY MENU %%% : Turn on Chemistry? : T Use linear. strat. chem?: T => Use Linoz for O3? : T Use UCX strat. chem? : T Active strat. H2O? : T Overhead O3 for FAST-JX :--- => Online O3 from model: T => O3 from met fields : T => TOMS/SBUV O3 : F Gamma HO2 : 0.2 ------------------------+------------------------------------------------------ %%% PHOTOLYSIS MENU %%% : FAST-JX directory : /projects/horowitz_group/GEOSChem_input_data/ExtData/CHEM_INPUTS/FAST_JX/v2020-02/ ------------------------+------------------------------------------------------ %%% RADIATION MENU %%% : AOD Wavelength (nm) : 550 Turn on RRTMG? : F Calculate LW fluxes? : F Calculate SW fluxes? : F Clear-sky flux? : F All-sky flux? : F Radiation Timestep [sec]: 10800 ------------------------+------------------------------------------------------ %%% OBSPACK MENU %%% : Turn on ObsPack diag? : F Quiet logfile output : F ObsPack input file : ./obspack_co2_1_OCO2MIP_2018-11-28.YYYYMMDD.nc ObsPack output file : ./OutputDir/GEOSChem.ObsPack.YYYYMMDD_hhmmz.nc4 ObsPack output species : NO CO O3 ------------------------+------------------------------------------------------ ############################################################################### ##### THE FOLLOWING MENUS ARE ONLY READ WHEN YOU COMPILE GEOS-Chem ##### ##### WITH THE BPCH_DIAG=y OPTION. ##### ##### ##### ##### BPCH_DIAG=y IS ALREADY TURNED ON BY DEFAULT FOR: ##### ##### (1) TOMAS simulations ##### ##### (2) RRTMG simulations ##### ##### (3) Hg simulations ##### ##### (4) POPs simulatons ##### ##### ##### ##### FOR ALL OTHER SIMULATIONS, BPCH DIAGNOSTICS ARE TURNED OFF BY ##### ##### DEFAULT (i.e. BPCH_DIAG=n IS USED UNLESS YOU SPECIFY OTHERWISE). ##### ############################################################################### ------------------------+------------------------------------------------------ %%% OUTPUT MENU %%% : 123456789.123456789.123456789.1--1=ZERO+2=BPCH Schedule output for JAN : 3000000000000000000000000000000 Schedule output for FEB : 30000000000000000000000000000 Schedule output for MAR : 3000000000000000000000000000000 Schedule output for APR : 300000000000000000000000000000 Schedule output for MAY : 3000000000000000000000000000000 Schedule output for JUN : 300000000000000000000000000000 Schedule output for JUL : 3000000000000000000000000000000 Schedule output for AUG : 3000000000000000000000000000000 Schedule output for SEP : 300000000000000000000000000000 Schedule output for OCT : 3000000000000000000000000000000 Schedule output for NOV : 300000000000000000000000000000 Schedule output for DEC : 3000000000000000000000000000000 ------------------------+------------------------------------------------------ %%% GAMAP MENU %%% : diaginfo.dat path : diaginfo.dat tracerinfo.dat path : tracerinfo.dat ------------------------+------------------------------------------------------ %%% DIAGNOSTIC MENU %%% : Binary punch file name : ./OutputDir/GEOSChem.YYYYMMDD.bpch Diagnostic Entries ---> : L Tracers to print out for each diagnostic ND03: Hg emissions, P/L : 0 all ND06: Dust aer source : 1 all ND44: Drydep flx/vel : 1 all ND53: POPs Emissions : 0 all ND59: TOMAS aerosol emis: 0 all ND60: TOMAS rate : 0 all ND61: TOMAS 3D rate : 0 all ND72: Radiative output : 0 all ------------------------+------------------------------------------------------ %%% PLANEFLIGHT MENU %%%: Turn on plane flt diag? : F Flight track info file : Planeflight.dat.YYYYMMDD Output file name : plane.log.YYYYMMDD ------------------------------------------------------------------------------- %%% ND51 MENU %%% : Turn on ND51 diagnostic : F LT avg timeseries file : ts_satellite.YYYYMMDD.bpch Output as HDF5? : F Tracers to include : 1 2 501 GMT Hour for disk write : 0 Avg Period [LT hours] : 9 11 IMIN, IMAX of region : 1 72 JMIN, JMAX of region : 1 46 LMIN, LMAX of region : 1 40 ------------------------------------------------------------------------------- %%% ND51b MENU %%% : Turn on ND51b diagnstic : F LT avg timeseries file : ts_13_15.NA.YYYYMMDD.bpch Output as HDF5? : F Tracers to include : 1 2 501 GMT Hour for disk write : 1 Avg Period [LT hours] : 13 15 IMIN, IMAX of region : 1 72 JMIN, JMAX of region : 1 46 LMIN, LMAX of region : 1 1 ------------------------------------------------------------------------------- %%% PROD & LOSS MENU %%%: ### ONLY NEEDED FOR TOMAS ### Turn on P/L (ND65) diag?: T # of levels for ND65 : 72 ------------------------+------------------------------------------------------ END OF FILE : ------------------------+------------------------------------------------------