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UVFlux diagnostics all zero when using Cloud-J photolysis #2447

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lizziel opened this issue Sep 3, 2024 · 2 comments
Open

UVFlux diagnostics all zero when using Cloud-J photolysis #2447

lizziel opened this issue Sep 3, 2024 · 2 comments
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category: Bug Something isn't working never stale Never label this issue as stale topic: Diagnostics Related to output diagnostic data
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@lizziel
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lizziel commented Sep 3, 2024

Your name

Lizzie Lundgren

Your affiliation

Harvard University

What happened? What did you expect to happen?

Setting UV flux diagnostics in the Cloud-J interface module relies on several arrays that are computed internally within Cloud-J. However, these arrays are not currently output from Cloud-J which results in the GEOS-Chem UV flux diagnostics having values of all zeros.

I created a feature request on the Cloud-J repository to add the needed arrays to the Cloud_JX output list. Once that is implemented we can use the new outputs when setting the UV flux diagnostics and this issue will be fixed.

What are the steps to reproduce the bug?

Run GEOS-Chem full chemistry simulation with Cloud-J photolysis and UV flux diagnostics on.

Please attach any relevant configuration and log files.

No response

What GEOS-Chem version were you using?

14.4.3

What environment were you running GEOS-Chem on?

Local cluster

What compiler and version were you using?

gcc 10.2.0

Will you be addressing this bug yourself?

Yes

In what configuration were you running GEOS-Chem?

GCClassic

What simulation were you running?

Full chemistry

As what resolution were you running GEOS-Chem?

4x5

What meteorology fields did you use?

MERRA-2

Additional information

Cloud-J feature request: geoschem/Cloud-J#25

@lizziel lizziel added category: Bug Something isn't working topic: Diagnostics Related to output diagnostic data labels Sep 3, 2024
@lizziel lizziel added this to the 14.5.1 milestone Sep 3, 2024
@lizziel lizziel self-assigned this Sep 3, 2024
@yantosca
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yantosca commented Sep 3, 2024

Also see related issue geoschem/GCHP#436

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This issue has been automatically marked as stale because it has not had recent activity. If there are no updates within 7 days it will be closed. You can add the "never stale" tag to prevent the issue from closing this issue.

@github-actions github-actions bot added the stale No recent activity on this issue label Nov 25, 2024
@yantosca yantosca added never stale Never label this issue as stale and removed stale No recent activity on this issue labels Nov 25, 2024
@lizziel lizziel modified the milestones: 14.5.1, 14.6.0 Jan 9, 2025
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Labels
category: Bug Something isn't working never stale Never label this issue as stale topic: Diagnostics Related to output diagnostic data
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