Merge pull request #2 from ghammad/develop

Develop

.gitlab-ci.yml

@@ -44,9 +44,10 @@ test:
 pages:
   stage: deploy
   script:
-  - pip install sphinx sphinx-bootstrap-theme
+  - pip install sphinx sphinx-bootstrap-theme nbsphinx
+  - mkdir -p ../pyActigraphy-docs/html
   - cd docs ; make html
-  - mv build/html/ ../public/
+  - mv ../../pyActigraphy-docs/html/ ../public/
   artifacts:
     paths:
     - public

README.rst

@@ -2,6 +2,8 @@
   :target: https://www.gnu.org/licenses/gpl-3.0
 .. image:: https://gitlab.com/ghammad/pyActigraphy/badges/master/pipeline.svg
   :target: https://gitlab.com/ghammad/pyActigraphy/commits/master
+.. image:: https://gitlab.com/ghammad/pyActigraphy/badges/master/coverage.svg
+  :target: https://gitlab.com/ghammad/pyActigraphy/commits/master
 
 **pyActigraphy**
 ================

docs/source/conf.py

@@ -72,7 +72,7 @@ def run(self):
 
 def setup(app):
     app.add_directive('autoautosummary', AutoAutoSummary)
-
+    app.add_javascript('https://cdnjs.cloudflare.com/ajax/libs/require.js/2.1.10/require.min.js')
 # -- Project information -----------------------------------------------------
 
 
@@ -106,7 +106,8 @@ def setup(app):
     'sphinx.ext.todo',
     'sphinx.ext.viewcode',
     'nbsphinx',
-    'numpydoc'
+    'numpydoc',
+    # 'bokeh.sphinxext.bokeh_plot'
 ]
 
 # Generate the API documentation when building
@@ -167,10 +168,10 @@ def setup(app):
 
     # A list of tuples containing pages or urls to link to.
     'navbar_links': [
-        ("Quick Start", "quickstart"),
+        # ("Quick Start", "quickstart"),
         ("Documentation", "documentation"),
         ("API", "api"),
-        ("Examples", "auto_examples/index"),
+        # ("Examples", "auto_examples/index"),
     ],
 
     # Render the next and previous page links in navbar. (Default: true)

docs/source/documentation.rst

@@ -2,3 +2,4 @@
    :maxdepth: 1
 
    pyActigraphy-Intro.ipynb
+   pyActigraphy-Non-parametric-variables.ipynb