Dockerfile_ubuntu

FROM ubuntu:19.04

# Update and upgrade distribution
RUN apt-get update && \
    apt-get upgrade -y

# Tools necessary for installing and configuring Ubuntu
RUN apt-get install -y \
    apt-utils \
    locales \
    tzdata

# Timezone
RUN echo "Europe/Paris" | tee /etc/timezone && \
    ln -fs /usr/share/zoneinfo/Europe/Paris /etc/localtime && \
    dpkg-reconfigure -f noninteractive tzdata

# Locale with UTF-8 support
RUN echo en_US.UTF-8 UTF-8 >> /etc/locale.gen && \
    locale-gen && \
    update-locale LC_ALL=en_US.UTF-8 LANG=en_US.UTF-8
ENV LANG en_US.UTF-8
ENV LANGUAGE en_US:en
ENV LC_ALL en_US.UTF-8

# Required for Gudhi compilation
RUN apt-get install -y make \
    g++ \
    cmake \
    graphviz \
    perl \
    texlive-bibtex-extra \
    biber \
    doxygen \
    libboost-all-dev \
    libeigen3-dev \
    libgmp3-dev \
    libmpfr-dev \
    libtbb-dev \
    libcgal-dev \
    locales \
    python3 \
    python3-pip \
    python3-pytest \
    python3-tk \
    libfreetype6-dev \
    pkg-config

RUN pip3 install \
    numpy \
    matplotlib \
    scipy \
    Cython \
    sphinx \
    sphinxcontrib-bibtex

# apt clean up
RUN apt autoremove && rm -rf /var/lib/apt/lists/*