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parse_mothur_tax_summary file parsing error #211

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zachary-foster opened this issue Feb 1, 2018 · 1 comment

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zachary-foster commented Feb 1, 2018

I got an email reporting the following error:

> setwd("/Users/garamirez/Documents/MPbio_MoBio/Kitome_MB_MP/")

> summary_path=("Kitome.tax.summary")

> data=parse_mothur_tax_summary(summary_path)

Error in read.table(file = file, header = header, sep = sep, quote = quote,  : 

  unused argument (file_path = "Kitome.tax.summary")

The text was updated successfully, but these errors were encountered:

zachary-foster added the bug label

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zachary-foster commented Feb 1, 2018

Confirmed:

> parse_mothur_tax_summary(file = "tests/testthat/example_data/mothur_summary.txt")
Error in read.table(file = file, header = header, sep = sep, quote = quote,  : 
  unused argument (file_path = "tests/testthat/example_data/mothur_summary.txt")

zachary-foster closed this as completed in

037c6ff

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