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Erik Wright: A Biologist Using High Throughput Computing to Unravel Antibiotic Resistance
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<span class="text-muted text-decoration-none">November 21, 2024</span>
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Collaborations Between Two National Laboratories and the OSG Consortium Propel Nuclear and High-Energy Physics Forward
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<span class="text-muted text-decoration-none">July 25, 2024</span>
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NOAA funded marine scientist uses OSPool access to high throughput computing to explode her boundaries of research
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<span class="text-muted text-decoration-none">June 13, 2024</span>
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Addressing the challenges of transferring large datasets with the OSDF
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<span class="text-muted text-decoration-none">May 14, 2024</span>
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<h5><a class="text-decoration-none" href="/featured-users/2022-04-25-Natzke.html">Learning and adapting with OSG: Investigating the strong nuclear force</a></h5>
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<tr><th>HTCSS</th></tr>
<tr><td><a href="/description.html">What is HTCSS?</a></td></tr>
<tr><td><a href="/logos/">Logos</a></td></tr>
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<tr><td><a href="https://chtc.cs.wisc.edu/people">Staff ⬏</a></td></tr>
<tr><td><a href="https://chtc.cs.wisc.edu/jobs">Jobs ⬏</a></td></tr>
<tr><td><a href="https://chtc.cs.wisc.edu/research">Research & Publications ⬏</a></td></tr>
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<h5><a class="text-decoration-none" href="/description.html">What is HTCSS?</a></h5>
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HTCondor Software Suite (HTCSS) provides an array of services for automating
and managing batch workloads and computing resources.
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<span class="fs-3">Research Publications and Technical Information</span>
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</div>
<div class="container-xxl pb-4">
<a href="#overview">Overview</a>
<a href="#match">Matchmaking and ClassAds</a>
<a href="#workflow">Workflow and DAGMan</a>
<a href="#resource">Resource Management</a>
<a href="#checkpoint">Checkpointing</a>
<a href="#data_intensive">Data Intensive Computing</a>
<a href="#grid">Grid Computing</a>
<a href="#mw">Master-Worker</a>
<a href="#java">Java</a>
<a href="#remote">Remote Execution and Interposition Agents</a>
<a href="#security">Security</a>
<a href="#scalability">Scalability and Performance</a>
<a href="#experience">Experience</a>
<a href="#science">Scientific Applications</a>
<a href="#scheduling">Scheduling</a>
<a href="#background">Background Work</a>
<a href="#miscellaneous">Miscellaneous</a>
<a href="#nmi">NMI Build & Test</a>
<a href="#dissertations">PhD Dissertations</a>
<hr />
<a id="overview"></a>
<h3>Overview</h3>
<ul>
<li>
Douglas Thain, Todd Tannenbaum, and Miron Livny,
"Distributed Computing in Practice: The Condor Experience"
<em>Concurrency and Computation: Practice and Experience</em>,
Vol. 17, No. 2-4, pages 323-356, February-April, 2005.
<a href="/doc/condor-practice.pdf">[PDF]</a>
<a href="/doc/condor-bibtex.html#condor-practice">[BibTeX Source for Citation]</a>
</li>
<li>
Douglas Thain and Miron Livny,
"Building Reliable Clients and Servers",
in Ian Foster and Carl Kesselman, editors,
<em>The Grid: Blueprint for a New Computing Infrastructure</em>,
Morgan Kaufmann, 2003, 2nd edition. ISBN: 1-55860-933-4.
<a href="/doc/grid2-ch19.pdf">[PDF]</a>
<a href="/doc/condor-bibtex.html#grid2-ch19">[BibTeX Source for Citation]</a>
</li>
<li>
Douglas Thain, Todd Tannenbaum, and Miron Livny,
"Condor and the Grid",
in Fran Berman, Anthony J.G. Hey, Geoffrey Fox, editors,
<em>Grid Computing: Making The Global Infrastructure a Reality</em>,
John Wiley, 2003.
ISBN: 0-470-85319-0
<a href="http://media.wiley.com/product_data/excerpt/90/04708531/0470853190.pdf">[PDF]</a>
<!-- Moved <a href="http://www.wiley.com/cda/cover/0,,0470853190|excerpt,00.pdf">[PDF]</a>-->
<a href="/doc/condor-bibtex.html#grid%20chapter%201">[BibTeX Source for Citation]</a>
</li>
<li>
Todd Tannenbaum, Derek Wright, Karen Miller, and Miron Livny,
"Condor - A Distributed Job Scheduler",
in Thomas Sterling, editor,
<em>Beowulf Cluster Computing with Linux</em>,
The MIT Press, 2002.
ISBN: 0-262-69274-0
<a href="/doc/beowulf-chapter-rev1.ps">[Postscript]</a>
<a href="/doc/beowulf-chapter-rev1.pdf">[PDF]</a>
<a href="/doc/condor-bibtex.html#beowulfbook-condor">[BibTeX Source for Citation]</a>
<a href="https://mitpress.mit.edu/">[MIT Press' Web Page]</a>
The MIT Press is pleased to present material from a preliminary draft of
<em>Beowulf Cluster Computing with Linux</em>.
This material is Copyright 2002 Massachusetts Institute of Technology, and
may not be used or distributed for any commercial purpose without the
express written consent of The MIT Press. Because
this material was a draft chapter, neither
The MIT Press nor the authors can be held liable for changes or
alternations in the final edition.
</li>
<li>
Jim Basney and Miron Livny,
"Deploying a High Throughput Computing Cluster",
<em>High Performance Cluster Computing</em>, Rajkumar Buyya, Editor,
Vol. 1, Chapter 5, Prentice Hall PTR, May 1999.
<a href="/doc/hpcc-chapter.ps">[Postscript]</a>
<a href="/doc/hpcc-chapter.pdf">[PDF]</a>
<a href="/doc/condor-bibtex.html#htc-deployment-chapter">[BibTeX Source for Citation]</a>
</li>
<li>
Miron Livny, Jim Basney, Rajesh Raman, and Todd Tannenbaum,
"Mechanisms for High Throughput Computing",
<em>SPEEDUP Journal</em>, Vol. 11, No. 1, June 1997.
<a href="/doc/htc_mech.ps">[Postscript]</a>
<a href="/doc/htc_mech.pdf">[PDF]</a>
<a href="/doc/condor-bibtex.html#htc-mechanisms">[BibTeX Source for Citation]</a>
</li>
<li>
Jim Basney, Miron Livny, and Todd Tannenbaum,
"High Throughput Computing with Condor",
<em>HPCU news</em>, Volume 1(2), June 1997.
<!-- This link disabled, as the hpcu domain has been claimed by someone else.
<a href="http://www.hpcu.org/hpcunews/vol1/issue2/condor.html">[Postscript]</a>
-->
</li>
<li>
D. H. J Epema, Miron Livny, R. van Dantzig, X. Evers, and Jim Pruyne,
"A Worldwide Flock of Condors : Load Sharing among Workstation Clusters"
<em>Journal on Future Generations of Computer Systems</em>, Volume 12, 1996
<a href="/doc/flock.ps">[Postscript]</a>
<a href="/doc/flock.pdf">[PDF]</a>
<a href="/doc/condor-bibtex.html#condor-flock">[BibTeX Source for Citation]</a>
</li>
<li>
Scott Fields,
"Hunting for Wasted Computing Power",
1993 Research Sampler, University of Wisconsin-Madison.
<a href="/doc/WiscIdea.html">[HTML]</a>
</li>
<li>
Michael Litzkow, Miron Livny, and Matt Mutka,
"Condor - A Hunter of Idle Workstations",
<em> Proceedings of the 8th International Conference of Distributed Computing Systems, </em>
pages 104-111, June, 1988.
<a href="/doc/icdcs1988.pdf">[PDF]</a>
<a href="/doc/condor-bibtex.html#condor-hunter">[BibTeX Source for Citation]</a>
</li>
<li>
Michael Litzkow,
"Remote Unix - Turning Idle Workstations into Cycle Servers",
<em>Proceedings of Usenix Summer Conference</em>, pages 381-384, 1987.
<a href="/doc/remoteunix.ps">[Postscript]</a>
<a href="/doc/remoteunix.pdf">[PDF]</a>
<a href="/doc/condor-bibtex.html#litzkow-cycles">[BibTeX Source for Citation]</a>
</li>
</ul>
<a id="match"></a>
<h3>Matchmaking and ClassAds</h3>
<ul>
<li>
Nicholas Coleman, "Distributed Policy Specification and Interpretation with
Classified Advertisements", Practical Aspects of Declarative Languages, Lecture
Notes in Computer Science Volume 7149, 2012, pp 198-211, January 2012.
<a href="/doc/distributed_policy_2012.pdf">[PDF]</a>
</li>
<li>
Rajesh Raman, Miron Livny, and Marvin Solomon,
"Policy Driven Heterogeneous Resource Co-Allocation with Gangmatching",
Proceedings of the Twelfth IEEE International Symposium on
High-Performance Distributed Computing, June, 2003, Seattle, WA
<a href="/doc/gangmatching-hpdc12.ps">[Postscript]</a>
<a href="/doc/gangmatching-hpdc12.pdf">[PDF]</a>
</li>
<li>
Nicholas Coleman, Rajesh Raman, Miron Livny and Marvin Solomon,
"Distributed Policy Management and Comprehension with Classified
Advertisements",
University of Wisconsin-Madison Computer Sciences Technical Report #1481,
April 2003.
<a href="/doc/ncoleman_tr1481.ps">[Postscript]</a>
<a href="/doc/ncoleman_tr1481.pdf">[PDF]</a>
<a href="/doc/condor-bibtex.html#ncoleman-tr1481">[BibTeX Source for Citation]</a>
</li>
<li>
Nicholas Coleman, "An Implementation of Matchmaking Analysis in Condor",
<em>Masters' Project report</em>,University of Wisconsin, Madison, May 2001.
<a href="/doc/match_analysis.ps">[Postscript]</a>
<a href="/doc/match_analysis.pdf">[PDF]</a>
<a href="/doc/condor-bibtex.html#ncoleman-mr">[BibTeX Source for Citation]</a>
</li>
<li>
Rajesh Raman, Miron Livny, and Marvin Solomon,
"Resource Management through Multilateral Matchmaking",
<em>Proceedings of the Ninth IEEE Symposium on High Performance Distributed Computing (HPDC9)</em>,
Pittsburgh, Pennsylvania, August 2000, pp 290-291.
<a href="/doc/gangmatching.ps">[Postscript]</a>
<a href="/doc/gangmatching.pdf">[PDF]</a>
<a href="/doc/condor-bibtex.html#raman-hpdc9">[BibTeX Source for Citation]</a>
</li>
<li>
Rajesh Raman, Miron Livny, and Marvin Solomon,
"Matchmaking: Distributed Resource Management for High Throughput Computing",
<em>Proceedings of the Seventh IEEE International Symposium on High Performance Distributed Computing</em>, July 28-31, 1998, Chicago, IL.
<a href="/doc/hpdc98.ps">[Postscript]</a>
<a href="/doc/hpdc98.pdf">[PDF]</a>
<a href="/doc/condor-bibtex.html#raman-hpdc7">[BibTeX Source for Citation]</a>
</li>
</ul>
<a id="workflow"></a>
<h3>Workflow and DAGMan</h3>
<ul>
<li>Peter Couvares, Tevik Kosar, Alain Roy, Jeff Weber and Kent
Wenger, "Workflow in Condor", in <em>In Workflows for e-Science</em>, Editors: I.Taylor, E.Deelman, D.Gannon,
M.Shields, Springer Press, January 2007 (ISBN: 1-84628-519-4)
<a href="/doc/workflow_condor_2007.pdf">[PDF]</a>
</li>
</ul>
<a id="resource"></a>
<h3>Resource Management</h3>
<ul>
<li>
Zhe Zhang, Brian Bockelman, Dale Carder, and Todd Tannenbaum,
"Lark: Bringing Network Awareness to High Throughput Computing",
<em>Proceedings of the 15th IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing (CCGrid 2015)</em>, Shenzhen, Guangdong, China, May 2015.
<a href="/doc/lark-ccgrid2015.pdf">[PDF]</a>
</li>
<li>
Jim Basney and Miron Livny,
"Managing Network Resources in Condor",
<em>Proceedings of the Ninth IEEE Symposium on High Performance Distributed Computing (HPDC9)</em>,
Pittsburgh, Pennsylvania, August 2000, pp 298-299.
<a href="/doc/netman-hpdc9.ps">[Postscript]</a>
<a href="/doc/netman-hpdc9.pdf">[PDF]</a>
<a href="/doc/condor-bibtex.html#basney-hpdc9">[BibTeX Source for Citation]</a>
</li>
<li>
Jim Basney and Miron Livny,
"Improving Goodput by Co-scheduling CPU and Network Capacity",
<em>International Journal of High Performance Computing Applications</em>,
Volume 13(3), Fall 1999.
<a href="/doc/goodput.ps">[Postscript]</a>
<a href="/doc/goodput.pdf">[PDF]</a>
<a href="/doc/condor-bibtex.html#basney-goodput">[BibTeX Source for Citation]</a>
</li>
<li>
Miron Livny and Rajesh Raman,
"High Throughput Resource Management",
chapter 13 in <em>The Grid: Blueprint for a New Computing Infrastructure</em>,
Morgan Kaufmann, San Francisco, California, 1999.
<a href="/doc/hpdc-chapter.ps">[Postscript]</a>
<a href="/doc/hpdc-chapter.pdf">[PDF]</a>
<a href="/doc/condor-bibtex.html#gridbook-htc">[BibTeX Source for Citation]</a>
Morgan Kaufmann is pleased to present material from a preliminary draft of
<em>High Performance Distributed Computing: Building a Computational Grid</em>;
the material is Copyright 1997 Morgan Kaufmann Publishers. This
material may not be used or distributed for any commercial purpose without the
express written consent of Morgan Kaufmann Publishers. Please note that
this material is a draft of forthcoming publication, and as such neither
Morgan Kaufmann nor the author can be held liable for changes or
alternations in the final edition.
</li>
<li>
Matt Mutka and Miron Livny,
"The Available Capacity of a Privately Owned Workstation Environment",
<em>Performance Evaluation</em>, vol. 12, no. 4 pp. 269-284, July, 1991.
<a href="/doc/condor-bibtex.html#mutka-pe">[BibTeX Source for Citation]</a>
</li>
<li>
Matt Mutka and Miron Livny,
"Profiling Workstations' Available Capacity for Remote Execution",
<em>Performance '87</em>,12th IFIP WG 7.3, pp. 529-544, December 1987.
<A href="/doc/profiling_availability.pdf">[PDF]</A>
<a href="/doc/condor-bibtex.html#mutka-p87">[BibTeX Source for Citation]</a>
</li>
</ul>
<a id="checkpoint"></a>
<h3>Checkpointing</h3>
<ul>
<li>
Joe Meehean and Miron Livny,
"A Service Migration Case Study: Migrating the Condor Schedd",
<em>Midwest Instruction and Computing Symposium</em>, April 2005.
<a href="/doc/schedd-migration-mics.ps">[Postscript]</a>
<a href="/doc/schedd-migration-mics.pdf">[PDF]</a>
<a href="/doc/condor-bibtex.html#meehean-mics2005">[BibTeX Source for Citation]</a>
</li>
<li>
Jim Basney, Miron Livny, and Paolo Mazzanti,
"Utilizing Widely Distributed Computational Resources Efficiently with Execution Domains",
<em>Computer Physics Communications</em>, 2001.
(This is an extended version of the CHEP 2000 paper below.)
<a href="/doc/cpc.ps">[Postscript]</a>
<a href="/doc/cpc.pdf">[PDF]</a>
<a href="/doc/condor-bibtex.html#basney-cpc">[BibTeX Source for Citation]</a>
</li>
<li>
Jim Basney, Miron Livny, and Paolo Mazzanti,
"Harnessing the Capacity of Computational Grids for High Energy Physics",
<em>Proceedings of the International Conference on Computing in High Energy and
Nuclear Physics (CHEP 2000)</em>,
February 2000, Padova, Italy.
<a href="/doc/exec-domains.ps">[Postscript]</a>
<a href="/doc/exec-domains.pdf">[PDF]</a>
<a href="/doc/condor-bibtex.html#basney-chep2000">[BibTeX Source for Citation]</a>
</li>
<li>
Michael Litzkow, Todd Tannenbaum, Jim Basney, and Miron Livny,
"Checkpoint and Migration of UNIX Processes in the Condor Distributed Processing System",
University of Wisconsin-Madison Computer Sciences Technical Report #1346,