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pom.xml
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pom.xml
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<?xml version="1.0" encoding="UTF-8"?>
<project xmlns="http://maven.apache.org/POM/4.0.0"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
<modelVersion>4.0.0</modelVersion>
<groupId>com</groupId>
<artifactId>SSIC</artifactId>
<version>1.0.0</version>
<packaging>jar</packaging>
<properties>
<project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
<maven.compiler.source>11</maven.compiler.source>
<maven.compiler.target>11</maven.compiler.target>
</properties>
<build>
<plugins>
<plugin>
<artifactId>maven-assembly-plugin</artifactId>
<executions>
<execution>
<phase>package</phase>
<goals>
<goal>single</goal>
</goals>
</execution>
</executions>
<configuration>
<archive>
<manifest>
<addClasspath>true</addClasspath>
<mainClass>ssic.SSIC</mainClass>
</manifest>
</archive>
<descriptorRefs>
<descriptorRef>jar-with-dependencies</descriptorRef>
</descriptorRefs>
<appendAssemblyId>false</appendAssemblyId>
</configuration>
</plugin>
</plugins>
</build>
<repositories>
<repository>
<id>biojava-legacy-repo</id>
<name>BioJava's Git based legacy maven repo</name>
<url>https://github.com/biojava/maven-repo/raw/master/</url>
</repository>
</repositories>
<dependencies>
<dependency>
<groupId>org.biojava</groupId>
<artifactId>biojava3-core</artifactId>
<version>3.1.0</version>
</dependency>
<dependency>
<groupId>org.biojava</groupId>
<artifactId>biojava3-alignment</artifactId>
<version>3.1.0</version>
</dependency>
</dependencies>
</project>