From 38e0d5004634c197f893b183f70d26d8a0bea02c Mon Sep 17 00:00:00 2001 From: Dietmar Rieder Date: Wed, 15 Jun 2022 10:56:36 +0200 Subject: [PATCH] bump year --- src/meRanGh.pl | 6 +++--- src/meRanGs.pl | 6 +++--- src/meRanT.pl | 18 ++++++++---------- 3 files changed, 14 insertions(+), 16 deletions(-) diff --git a/src/meRanGh.pl b/src/meRanGh.pl index d2eb668..ac1d519 100755 --- a/src/meRanGh.pl +++ b/src/meRanGh.pl @@ -3,7 +3,7 @@ # # meRanGh # -# Copyright 2019 Dietmar Rieder +# Copyright 2022 Dietmar Rieder # # This program is free software; you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by @@ -5615,11 +5615,11 @@ =head1 LICENSE Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA. - Copyright (C) 2016 D.Rieder + Copyright (C) 2022 D.Rieder =head1 COPYRIGHT - Copyright (C) 2016 Dietmar Rieder. All Rights Reserved. + Copyright (C) 2022 Dietmar Rieder. All Rights Reserved. =head1 AUTHOR diff --git a/src/meRanGs.pl b/src/meRanGs.pl index a8e878a..e5d4f45 100755 --- a/src/meRanGs.pl +++ b/src/meRanGs.pl @@ -3,7 +3,7 @@ # # meRanGs # -# Copyright 2019 Dietmar Rieder +# Copyright 2022 Dietmar Rieder # # This program is free software; you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by @@ -5682,11 +5682,11 @@ =head1 LICENSE Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA. - Copyright (C) 2016 D.Rieder + Copyright (C) 2022 D.Rieder =head1 COPYRIGHT - Copyright (C) 2016 Dietmar Rieder. All Rights Reserved. + Copyright (C) 2022 Dietmar Rieder. All Rights Reserved. =head1 AUTHOR diff --git a/src/meRanT.pl b/src/meRanT.pl index 2753a87..db60471 100755 --- a/src/meRanT.pl +++ b/src/meRanT.pl @@ -3,7 +3,7 @@ # # meRanT.pl # -# Copyright 2019 Dietmar Rieder +# Copyright 2022 Dietmar Rieder # # This program is free software; you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by @@ -3773,14 +3773,12 @@ =head2 Align directed/strand specific RNA-BSseq short reads to a transcriptome requires a transcript to gene mapping file (-i2g) "mm10.refSeqRNA2GeneName.map". This mapping file must be in the following tab delimited format: - #seqID Genesymbol sequencelength + #seqID Genesymbol sequencelength [...] - gi|568933834|ref|XR_376799.1| Mpv17 1474 - gi|568933835|ref|XR_376800.1| Mpv17 1301 - gi|568933836|ref|XR_376801.1| Mpv17 1840 - gi|120444911|ref|NM_011960.2| Parg 4391 - gi|58331157|ref|NM_017373.3| Nfil3 2019 - gi|115298679|ref|NM_172673.3| Frmd5 4218 + NR_046233.2 Rn45s 13400 + NR_003279.1 Rn28s1 4730 + NR_003280.2 Rs5-8s1 157 + NM_134105.2 Txndc11 1233 [...] Where each transcript in the transcript database (fasta) is mapped to a Genesymbol. @@ -4065,11 +4063,11 @@ =head1 LICENSE Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA. - Copyright (C) 2016 D.Rieder + Copyright (C) 2022 D.Rieder =head1 COPYRIGHT - Copyright (C) 2016 Dietmar Rieder. All Rights Reserved. + Copyright (C) 2022 Dietmar Rieder. All Rights Reserved. =head1 AUTHOR