From 737f975b0e257a279ae021457a897a6d40e2c86d Mon Sep 17 00:00:00 2001 From: Daniel Danis Date: Wed, 8 May 2024 21:09:48 -0400 Subject: [PATCH] Update urls after the move. --- README.md | 8 ++++---- docs/index.rst | 2 +- docs/setup.rst | 4 ++-- pyproject.toml | 5 ++++- 4 files changed, 11 insertions(+), 8 deletions(-) diff --git a/README.md b/README.md index 3621bb9..340ee06 100644 --- a/README.md +++ b/README.md @@ -2,8 +2,8 @@ ![PyPI - Python Version](https://img.shields.io/pypi/pyversions/hpo-toolkit) ![PyPi downloads](https://img.shields.io/pypi/dm/hpo-toolkit.svg?label=Pypi%20downloads) -![Build status](https://img.shields.io/github/actions/workflow/status/TheJacksonLaboratory/hpo-toolkit/python_ci.yml) -[![GitHub release](https://img.shields.io/github/release/TheJacksonLaboratory/hpo-toolkit.svg)](https://github.com/TheJacksonLaboratory/hpo-toolkit/releases) +![Build status](https://img.shields.io/github/actions/workflow/status/ielis/hpo-toolkit/python_ci.yml) +[![GitHub release](https://img.shields.io/github/release/ielis/hpo-toolkit.svg)](https://github.com/ielis/hpo-toolkit/releases) A toolkit for working with Human Phenotype Ontology (HPO) and HPO disease annotations in Python. @@ -39,5 +39,5 @@ You got yourself phenotype annotations of 12,468 rare diseases. Find more info in our detailed documentation: -- [Stable documentation](https://thejacksonlaboratory.github.io/hpo-toolkit/stable) (last release on `main` branch) -- [Latest documentation](https://thejacksonlaboratory.github.io/hpo-toolkit/latest) (bleeding edge, latest commit on `development` branch) +- [Stable documentation](https://ielis.github.io/hpo-toolkit/stable) (last release on `main` branch) +- [Latest documentation](https://ielis.github.io/hpo-toolkit/latest) (bleeding edge, latest commit on `development` branch) diff --git a/docs/index.rst b/docs/index.rst index bd907f9..35757a2 100644 --- a/docs/index.rst +++ b/docs/index.rst @@ -28,5 +28,5 @@ Feedback -------- The best place to leave feedback, ask questions, and report bugs is the -`HPO Toolkit's Issue Tracker `_. +`HPO Toolkit's Issue Tracker `_. diff --git a/docs/setup.rst b/docs/setup.rst index ef965fa..775d8ca 100644 --- a/docs/setup.rst +++ b/docs/setup.rst @@ -20,7 +20,7 @@ The bleeding edge code To access the bleeding edge features, the development version can be installed by:: - git clone https://github.com/TheJacksonLaboratory/hpo-toolkit.git + git clone https://github.com/ielis/hpo-toolkit.git cd hpo-toolkit git checkout development && git pull python3 -m pip install . @@ -49,7 +49,7 @@ Run benches Bench suites provide an idea about the performance of the library. Running a bench requires checking out the GitHub repository and installing HPO toolkit with `bench` dependencies:: - git clone https://github.com/TheJacksonLaboratory/hpo-toolkit.git + git clone https://github.com/ielis/hpo-toolkit.git cd hpo-toolkit python3 -m pip install .[bench] diff --git a/pyproject.toml b/pyproject.toml index fa48260..5519b9d 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -41,7 +41,10 @@ bench = [ ] [project.urls] -"Repository" = "https://github.com/TheJacksonLaboratory/hpo-toolkit" +homepage = "https://github.com/ielis/hpo-toolkit" +repository = "https://github.com/ielis/hpo-toolkit.git" +documentation = "https://ielis.github.io/hpo-toolkit/stable" +bugtracker = "https://github.com/ielis/hpo-toolkit/issues" [tool.setuptools] package-dir = { "" = "src" }