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Provide a mean for users to perform waveform extraction #842

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GaelleChapuis opened this issue Sep 18, 2024 · 1 comment
Closed

Provide a mean for users to perform waveform extraction #842

GaelleChapuis opened this issue Sep 18, 2024 · 1 comment
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@GaelleChapuis
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For some applications, such as Petrina or Han who want to get single spike waveforms, they may need to extract waveforms from the raw data themselves.
There are 3 components to this:

  1. Know which processing to perform on the raw data before extracting the waveform
  2. How to find the channels on the raw data associated with the spikes
  3. How to best save the data for efficient memory usage

On point 2:
In order to know on which channel a spike is, right now the information is hard to get: only the cluster holds the channel information, not each spike.

To get the information, one would need to apply the inverse of the drift correction

@oliche oliche self-assigned this Sep 23, 2024
@oliche
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oliche commented Oct 7, 2024

See ibl-neuropixel 1.4.0

@oliche oliche closed this as completed Oct 7, 2024
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