Makefile.PL

# Note: this file was auto-generated by Module::Build::Compat version 0.3800
require 5.006;
use ExtUtils::MakeMaker;

use File::Find;

use lib "lib";
use RUM::BinDeps;

use Text::Wrap;

RUM::BinDeps->new->fetch();

my @exe_files;
find sub {
    my $file = "bin/$_";
    push @exe_files, $file unless /^\./ || /~$/;
}, "bin";

WriteMakefile
(
  'PL_FILES' => {},
  'INSTALLDIRS' => 'site',
  'PMLIBDIRS' => ['lib', 'conf'],
  'NAME' => 'RUM::Pipeline',
  'EXE_FILES' => \@exe_files,
  'VERSION_FROM' => 'lib/RUM/Pipeline.pm',
  'PREREQ_PM' => {
                   'Test::More' => 0,
                   'autodie' => 0
                 },
)
;

sub MY::postamble {
    "index:\n\t\$(PREFIX)/bin/rum_indexes"
}

print <<EOF;

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

                      INSTALLATION INSTRUCTIONS

If you want to install RUM in a system location, you can run:

  make
  make install
  rum_indexes --prefix PREFIX
  rum_runner help

Otherwise you can run it from this location:

  ./bin/rum_indexes --prefix PREFIX
  ./bin/rum_runner help

RUM requires an index for each organism you will be working with.  The
"rum_indexes" step will prompt you for which indexes you need, and
then install them. PREFIX is the location where you want indexes
installed. We recomend that you install indexes in a place independent
of the RUM code itself, so that in the future you can upgrade the RUM
code without re-installing the indexes.
EOF