diff --git a/src/cellmap_models/pytorch/cosem/setup04/model.py b/src/cellmap_models/pytorch/cosem/setup04/model.py index 437f85f..613e0f5 100755 --- a/src/cellmap_models/pytorch/cosem/setup04/model.py +++ b/src/cellmap_models/pytorch/cosem/setup04/model.py @@ -24,3 +24,19 @@ final_feature_width = 12 * 6 classes_out = 14 +classes_channels = [ + "ecs", + "pm", + "mito", + "mito_mem", + "ves", + "ves_mem", + "endo", + "endo_mem", + "er", + "er_mem", + "eres", + "nuc", + "mt", + "mt_out", +] diff --git a/src/cellmap_models/pytorch/cosem/setup26_1/model.py b/src/cellmap_models/pytorch/cosem/setup26_1/model.py index bc9916e..f13ce4a 100755 --- a/src/cellmap_models/pytorch/cosem/setup26_1/model.py +++ b/src/cellmap_models/pytorch/cosem/setup26_1/model.py @@ -24,3 +24,4 @@ final_feature_width = 12 * 6 classes_out = 3 +classes_channels = ["mito", "mito_mem", "mito_ribo"] diff --git a/src/cellmap_models/pytorch/cosem/setup28/model.py b/src/cellmap_models/pytorch/cosem/setup28/model.py index a3d4e36..2689c3d 100755 --- a/src/cellmap_models/pytorch/cosem/setup28/model.py +++ b/src/cellmap_models/pytorch/cosem/setup28/model.py @@ -24,3 +24,4 @@ final_feature_width = 12 * 6 classes_out = 2 +classes_channels = ["er", "er_mem"] diff --git a/src/cellmap_models/pytorch/cosem/setup36/model.py b/src/cellmap_models/pytorch/cosem/setup36/model.py index a3d4e36..2abfad9 100755 --- a/src/cellmap_models/pytorch/cosem/setup36/model.py +++ b/src/cellmap_models/pytorch/cosem/setup36/model.py @@ -24,3 +24,4 @@ final_feature_width = 12 * 6 classes_out = 2 +classes_channels = ["nuc", "nucleo"] diff --git a/src/cellmap_models/pytorch/cosem/setup45/model.py b/src/cellmap_models/pytorch/cosem/setup45/model.py index 938344e..2b4d995 100755 --- a/src/cellmap_models/pytorch/cosem/setup45/model.py +++ b/src/cellmap_models/pytorch/cosem/setup45/model.py @@ -24,3 +24,4 @@ final_feature_width = 12 * 6 classes_out = 2 +classes_channels = ["ecs", "pm"]