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NAMESPACE
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NAMESPACE
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# Generated by roxygen2: do not edit by hand
export(download_example_files)
export(geom_annotation)
export(geom_hic)
export(geom_ideogram)
export(geom_loop)
export(geom_tad)
export(geom_track)
export(gghic)
export(theme_hic)
importFrom(AnnotationDbi,as.list)
importFrom(AnnotationDbi,loadDb)
importFrom(AnnotationDbi,saveDb)
importFrom(GenomicFeatures,genes)
importFrom(GenomicRanges,GRanges)
importFrom(GenomicRanges,GRangesList)
importFrom(GenomicRanges,end)
importFrom(GenomicRanges,findOverlaps)
importFrom(GenomicRanges,gaps)
importFrom(GenomicRanges,pintersect)
importFrom(GenomicRanges,reduce)
importFrom(GenomicRanges,split)
importFrom(GenomicRanges,start)
importFrom(Gviz,GeneRegionTrack)
importFrom(IRanges,IRanges)
importFrom(IRanges,overlapsAny)
importFrom(InteractionSet,anchors)
importFrom(InteractionSet,interactions)
importFrom(InteractionSet,pairdist)
importFrom(S4Vectors,"mcols<-")
importFrom(S4Vectors,mcols)
importFrom(S4Vectors,subjectHits)
importFrom(biovizBase,getBioColor)
importFrom(dplyr,bind_rows)
importFrom(dplyr,case_when)
importFrom(dplyr,distinct)
importFrom(dplyr,filter)
importFrom(dplyr,first)
importFrom(dplyr,group_by)
importFrom(dplyr,left_join)
importFrom(dplyr,mutate)
importFrom(dplyr,reframe)
importFrom(dplyr,rename)
importFrom(dplyr,row_number)
importFrom(dplyr,select)
importFrom(dplyr,slice)
importFrom(dplyr,slice_max)
importFrom(dplyr,slice_min)
importFrom(dplyr,summarise)
importFrom(dplyr,ungroup)
importFrom(ggplot2,"%+replace%")
importFrom(ggplot2,Geom)
importFrom(ggplot2,Stat)
importFrom(ggplot2,aes)
importFrom(ggplot2,coord_fixed)
importFrom(ggplot2,draw_key_blank)
importFrom(ggplot2,draw_key_path)
importFrom(ggplot2,draw_key_polygon)
importFrom(ggplot2,element_blank)
importFrom(ggplot2,element_line)
importFrom(ggplot2,ggplot)
importFrom(ggplot2,ggproto)
importFrom(ggplot2,layer)
importFrom(ggplot2,scale_fill_gradientn)
importFrom(ggplot2,scale_x_continuous)
importFrom(ggplot2,theme)
importFrom(ggplot2,theme_bw)
importFrom(ggrastr,rasterise)
importFrom(glue,glue)
importFrom(grDevices,colorRampPalette)
importFrom(grid,arrow)
importFrom(grid,gList)
importFrom(grid,gpar)
importFrom(grid,is.unit)
importFrom(grid,nullGrob)
importFrom(grid,pathGrob)
importFrom(grid,pointsGrob)
importFrom(grid,polygonGrob)
importFrom(grid,polylineGrob)
importFrom(grid,segmentsGrob)
importFrom(grid,textGrob)
importFrom(grid,unit)
importFrom(methods,is)
importFrom(purrr,map)
importFrom(purrr,map2)
importFrom(purrr,map_df)
importFrom(purrr,pmap)
importFrom(rappdirs,user_cache_dir)
importFrom(reticulate,import_from_path)
importFrom(rlang,"!!")
importFrom(rlang,":=")
importFrom(rlang,sym)
importFrom(rtracklayer,browserSession)
importFrom(rtracklayer,genome)
importFrom(rtracklayer,getTable)
importFrom(rtracklayer,import)
importFrom(rtracklayer,ucscTableQuery)
importFrom(scales,oob_squish)
importFrom(scales,unit_format)
importFrom(stats,setNames)
importFrom(tibble,as_tibble)
importFrom(tibble,is_tibble)
importFrom(tibble,tibble)
importFrom(tidyr,drop_na)
importFrom(tidyr,replace_na)
importFrom(txdbmaker,makeTxDb)
importFrom(txdbmaker,makeTxDbFromGFF)
importFrom(utils,download.file)
importFrom(vroom,cols)
importFrom(vroom,vroom)