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Kudos for the nice work.
One lttle question I have wondered whilst reading your paper was about that threshold which converts probabilities to basepairs.
Would you mind clarifying a bit how it was chosen?
The text was updated successfully, but these errors were encountered:
The threshold was determined by maximizing the Matthews Correlation Coefficient (MCC) on validation set (VL1). MCC was calculated for 1000 values between 0 and 1 at sampling rate 0.001. MCC on validation set was maximum at 0.335, therefore, we selected this value. All the model parameters were optimized for the validation sets.
Kudos for the nice work.
One lttle question I have wondered whilst reading your paper was about that threshold which converts probabilities to basepairs.
Would you mind clarifying a bit how it was chosen?
The text was updated successfully, but these errors were encountered: