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Releases: jbferet/biodivMapR

run biodivMapR directly on classification maps

29 Mar 16:47
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# biodivMapR v1.7.0

## Changes
- capacity to produce diversity maps based on classification raster

## Fixes
- warning eliminated when testing Selected_Features in Lib_MapFunctionalDiversity.R
- Corrected data extraction function using nbands in extract.big_raster and get_random_subset_from_image
- updated extract.big_raster and get_random_subset_from_image in order to account for 2D rasters which cannot be read with brick
- added driver definition when using read_stars (extract.big_raster)
- corrected vignettes (TypePCA used before defined in previous version)

biodivMapR is getting functional

10 Jun 15:12
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biodivMapR v1.5.1

Fixes

  • Fixed bug occuring when writing image if initial raster is not a multiple of the window size. no bug occur but the raster files have wrong information
  • fixed problem when performing estimation of biodiversity for plots outside of the raster: now the value is NA

biodivMapR v1.5.0

Changes

  • implemented MNF for dimensionality reduction
  • discarded HDR as input variable from get_random_subset_from_image
  • updated example file
  • added contribution of F de Boissieu
  • changed email address to teledetection.fr
  • updated diversity_from_plots
  • updated example script
  • Added functional diversity metrics
  • updated example script
  • updated vignette

includes stars and reads any file format as input

01 Jun 18:38
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biodivMapR v1.3.0

Changes

  • integrated stars package in order to read any file format, including TIFF format
  • developed a generic function to write rasters
  • prepared for MNF
  • changed default red band for the computation of NDVI: closest band to 690 nm is now selected instead of closest band to 700 nm

biodivMapR v1.2.0

01 May 15:09
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Fixes

  • fixed bug raised when processing data over large number of pixels (image products >2^31 bits)
  • fixed bug by adding elimination of bands disturbed by water vapor even when ContinuumRemoval set to FALSE

Changes

  • Changed name of default directory when saving image after calling raster2BIL
  • added documentation for raster data conversion using raster2BIL

biodivMapR v1.1.0

18 Feb 11:14
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Fixes

  • fixed bug in Lib_MapSpectralSpecies: remove constant bands from Subset$DataSubset if needed
  • fix bug when continuum removal applied on pixels with constant values which were not filtered in previous stages

Changes

  • Updated continuum removal
  • Named Continuum_Removal instead of CR
  • corrected documetation for perform_radiometric_filtering
  • Added an error report when spectral information is not conform with expectations (due to too high noise level for example, usually leading to NaN or Inf values after PCA)
  • Changed name for some variables in internal functions for consistency
  • will add documentation on how to analyze error reports