setup.cfg

[bumpversion]
current_version = 0.1.12
commit = True
tag = True

[bumpversion:file:lesion_metrics/__init__.py]
search = __version__ = "{current_version}"
replace = __version__ = "{new_version}"

[flake8]
exclude = docs
per-file-ignores = 
	__init__.py: F401
max-line-length = 88
extend-ignore = E203

[aliases]
test = pytest

[tool:pytest]
addopts = --doctest-modules --ignore=setup.py
doctest_optionflags = NORMALIZE_WHITESPACE IGNORE_EXCEPTION_DETAIL NUMBER

[metadata]
author = Jacob Reinhold
author_email = jcreinhold@gmail.com
name = lesion-metrics
version = attr: lesion_metrics.__version__
description = metrics for evaluating lesion segmentations
long_description = file: README.rst, HISTORY.rst
long_description_content_type = text/x-rst
keywords = lesion, metrics, segmentation, mri, ct, pet
license = Apache Software License 2.0
license_file = LICENSE
url = https://github.com/jcreinhold/lesion-metrics
project_urls = 
	Bug Tracker = https://github.com/jcreinhold/lesion-metrics/issues
	Documentation = https://lesion-metrics.readthedocs.io/
classifiers = 
	Development Status :: 4 - Beta
	Intended Audience :: Developers
	License :: OSI Approved :: Apache Software License
	Natural Language :: English
	Programming Language :: Python :: 3
	Programming Language :: Python :: 3 :: Only
	Programming Language :: Python :: 3.8
	Programming Language :: Python :: 3.9
	Programming Language :: Python :: Implementation :: CPython
	Typing :: Typed

[options]
zip_safe = False
include_package_data = True
packages = find:
python_requires = >= 3.8
install_requires = 
	pillow>=9.0.0
	scikit-image>=0.18,<1
	scipy>=1.6,<2
test_suite = tests

[options.packages.find]
include = 
	lesion_metrics
	lesion_metrics.*
exclude = 
	tests
	docs

[options.package_data]
lesion_metrics = py.typed

[options.extras_require]
cli = 
	numpy>=1.21,<2.0
	nibabel>=3,<4
	pandas>=1.3.5,<2
	pydicom>=2,<3
	pymedio>=0.1.8,<1
	SimpleITK>=2.1.0,<3

[options.entry_points]
console_scripts = 
	lesion-metrics=lesion_metrics.cli.aggregate:main
	per-lesion-metrics=lesion_metrics.cli.per_lesion:main