DESCRIPTION

Package: scCNAutils
Title: Functions to analyze copy number aberrations in single-cell data
Version: 0.0.0.9000
Authors@R: person("Jean", "Monlong", email = "jean.monlong@gmail.com", role = c("aut", "cre"))
Description: Functions to analyze copy number aberrations in single-cell data. A bunch of scripts and workflows to read and analyze scRNA-seq data and look at CNA-oriented signal.
Depends: R (>= 3.4.4)
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
Imports:
    Matrix,
    dplyr,
    magrittr,
    tidyr,
    rlang,
    parallel,
    ggplot2,
    data.table,
    Rtsne,
    FNN,
    igraph,
    RcppHMM,
    GenomicRanges,
    IRanges,
    shiny,
    rbokeh,
    scales,
    ggrepel,
    Rcpp
Suggests:
    testthat
RoxygenNote: 7.1.1
LinkingTo: Rcpp