Fail to install using pip (gcc compile time error)

[inarighas]

When installing fastwer-0-13 using pip, building wheels for the package breaks because of a subprocess-exited-with-error.

Full error:

>> $ pip install pybind11 fastwer

Requirement already satisfied: pybind11 in ./.venv/lib64/python3.11/site-packages (2.10.4)
Collecting fastwer
  Using cached fastwer-0.1.3.tar.gz (4.6 kB)
  Preparing metadata (setup.py) ... done
Building wheels for collected packages: fastwer
  Building wheel for fastwer (setup.py) ... error
  error: subprocess-exited-with-error
  
  × python setup.py bdist_wheel did not run successfully.
  │ exit code: 1
  ╰─> [107 lines of output]
      running bdist_wheel
      running build
      running build_py
      running build_ext
      creating tmp
      gcc -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -fPIC -I/home/inarighas/Projects/voice-transcript/.venv/include -I/usr/include/python3.11 -c /tmp/tmp7ny4ljxj.cpp -o tmp/tmp7ny4ljxj.o -std=c++17
      gcc -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -fPIC -I/home/inarighas/Projects/voice-transcript/.venv/include -I/usr/include/python3.11 -c /tmp/tmprbaqr7r2.cpp -o tmp/tmprbaqr7r2.o -fvisibility=hidden
      building 'fastwer' extension
      creating build
      creating build/temp.linux-x86_64-cpython-311
      creating build/temp.linux-x86_64-cpython-311/src
      gcc -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -fPIC -I/home/inarighas/Projects/voice-transcript/.venv/lib64/python3.11/site-packages/pybind11/include -I/home/inarighas/Projects/voice-transcript/.venv/lib64/python3.11/site-packages/pybind11/include -I/home/inarighas/Projects/voice-transcript/.venv/include -I/usr/include/python3.11 -c src/bindings.cpp -o build/temp.linux-x86_64-cpython-311/src/bindings.o -DVERSION_INFO=\"0.1.3\" -std=c++17 -fvisibility=hidden
      gcc -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -fPIC -I/home/inarighas/Projects/voice-transcript/.venv/lib64/python3.11/site-packages/pybind11/include -I/home/inarighas/Projects/voice-transcript/.venv/lib64/python3.11/site-packages/pybind11/include -I/home/inarighas/Projects/voice-transcript/.venv/include -I/usr/include/python3.11 -c src/fastwer.cpp -o build/temp.linux-x86_64-cpython-311/src/fastwer.o -DVERSION_INFO=\"0.1.3\" -std=c++17 -fvisibility=hidden
      In file included from src/fastwer.cpp:1:
      src/fastwer.hpp:19:38: error: ‘uint8_t’ has not been declared
         19 |     double round_to_digits(double d, uint8_t digits = 4);
            |                                      ^~~~~~~
      src/fastwer.hpp:21:10: error: ‘uint32_t’ was not declared in this scope
         21 |     pair<uint32_t, uint32_t> compute(string &hypo, string &ref, bool char_level = false);
            |          ^~~~~~~~
      src/fastwer.hpp:9:1: note: ‘uint32_t’ is defined in header ‘<cstdint>’; did you forget to ‘#include <cstdint>’?
          8 | #include <cassert>
        +++ |+#include <cstdint>
          9 |
      src/fastwer.hpp:21:20: error: ‘uint32_t’ was not declared in this scope
         21 |     pair<uint32_t, uint32_t> compute(string &hypo, string &ref, bool char_level = false);
            |                    ^~~~~~~~
      src/fastwer.hpp:21:20: note: ‘uint32_t’ is defined in header ‘<cstdint>’; did you forget to ‘#include <cstdint>’?
      src/fastwer.hpp:21:28: error: template argument 1 is invalid
         21 |     pair<uint32_t, uint32_t> compute(string &hypo, string &ref, bool char_level = false);
            |                            ^
      src/fastwer.hpp:21:28: error: template argument 2 is invalid
      src/fastwer.cpp:14:43: error: ‘uint8_t’ has not been declared
         14 | double fastwer::round_to_digits(double d, uint8_t digits) {
            |                                           ^~~~~~~
      src/fastwer.cpp:20:7: error: ‘uint32_t’ was not declared in this scope
         20 | pair <uint32_t, uint32_t> fastwer::compute(string &hypo, string &ref, bool char_level) {
            |       ^~~~~~~~
      src/fastwer.cpp:2:1: note: ‘uint32_t’ is defined in header ‘<cstdint>’; did you forget to ‘#include <cstdint>’?
          1 | #include "fastwer.hpp"
        +++ |+#include <cstdint>
          2 |
      src/fastwer.cpp:20:17: error: ‘uint32_t’ was not declared in this scope
         20 | pair <uint32_t, uint32_t> fastwer::compute(string &hypo, string &ref, bool char_level) {
            |                 ^~~~~~~~
      src/fastwer.cpp:20:17: note: ‘uint32_t’ is defined in header ‘<cstdint>’; did you forget to ‘#include <cstdint>’?
      src/fastwer.cpp:20:25: error: template argument 1 is invalid
         20 | pair <uint32_t, uint32_t> fastwer::compute(string &hypo, string &ref, bool char_level) {
            |                         ^
      src/fastwer.cpp:20:25: error: template argument 2 is invalid
      src/fastwer.cpp: In function ‘int fastwer::compute(std::string&, std::string&, bool)’:
      src/fastwer.cpp:25:5: error: ‘uint32_t’ was not declared in this scope
         25 |     uint32_t m = hypo_tokens.size() + 1, n = ref_tokens.size() + 1;
            |     ^~~~~~~~
      src/fastwer.cpp:25:5: note: ‘uint32_t’ is defined in header ‘<cstdint>’; did you forget to ‘#include <cstdint>’?
      src/fastwer.cpp:26:20: error: template argument 2 is invalid
         26 |     vector<uint32_t> f(m * n);
            |                    ^
      src/fastwer.cpp:26:24: error: ‘m’ was not declared in this scope
         26 |     vector<uint32_t> f(m * n);
            |                        ^
      src/fastwer.cpp:26:28: error: ‘n’ was not declared in this scope
         26 |     vector<uint32_t> f(m * n);
            |                            ^
      src/fastwer.cpp:32:21: error: expected ‘;’ before ‘matching_case’
         32 |             uint32_t matching_case = f[(i - 1) * n + (j - 1)] + (hypo_tokens[i - 1] == ref_tokens[j - 1] ? 0 : 1);
            |                     ^~~~~~~~~~~~~~
            |                     ;
      src/fastwer.cpp:33:46: error: ‘matching_case’ was not declared in this scope
         33 |             f[i * n + j] = min(f[i * n + j], matching_case);
            |                                              ^~~~~~~~~~~~~
      src/fastwer.cpp: In function ‘double fastwer::score_sent(std::string&, std::string&, bool)’:
      src/fastwer.cpp:40:10: error: ‘uint32_t’ was not declared in this scope
         40 |     pair<uint32_t, uint32_t> stats = fastwer::compute(hypo, ref, char_level);
            |          ^~~~~~~~
      src/fastwer.cpp:40:10: note: ‘uint32_t’ is defined in header ‘<cstdint>’; did you forget to ‘#include <cstdint>’?
      src/fastwer.cpp:40:28: error: template argument 1 is invalid
         40 |     pair<uint32_t, uint32_t> stats = fastwer::compute(hypo, ref, char_level);
            |                            ^
      src/fastwer.cpp:41:56: error: request for member ‘first’ in ‘stats’, which is of non-class type ‘int’
         41 |     return fastwer::round_to_digits(100 * double(stats.first) / stats.second, 4);
            |                                                        ^~~~~
      src/fastwer.cpp:41:71: error: request for member ‘second’ in ‘stats’, which is of non-class type ‘int’
         41 |     return fastwer::round_to_digits(100 * double(stats.first) / stats.second, 4);
            |                                                                       ^~~~~~
      src/fastwer.cpp: In function ‘double fastwer::score(std::vector<std::__cxx11::basic_string<char> >&, std::vector<std::__cxx11::basic_string<char> >&, bool)’:
      src/fastwer.cpp:47:17: error: ‘uint32_t’ was not declared in this scope
         47 |     vector<pair<uint32_t, uint32_t>> stats(n_examples);
            |                 ^~~~~~~~
      src/fastwer.cpp:47:17: note: ‘uint32_t’ is defined in header ‘<cstdint>’; did you forget to ‘#include <cstdint>’?
      src/fastwer.cpp:47:27: error: template argument 1 is invalid
         47 |     vector<pair<uint32_t, uint32_t>> stats(n_examples);
            |                           ^~~~~~~~
      src/fastwer.cpp:47:35: error: template argument 1 is invalid
         47 |     vector<pair<uint32_t, uint32_t>> stats(n_examples);
            |                                   ^~
      src/fastwer.cpp:47:35: error: template argument 2 is invalid
      src/fastwer.cpp:50:15: error: request for member ‘push_back’ in ‘stats’, which is of non-class type ‘int’
         50 |         stats.push_back(fastwer::compute(hypo[i], ref[i], char_level));
            |               ^~~~~~~~~
      src/fastwer.cpp:51:30: error: request for member ‘back’ in ‘stats’, which is of non-class type ‘int’
         51 |         total_edits += stats.back().first;
            |                              ^~~~
      src/fastwer.cpp:52:32: error: request for member ‘back’ in ‘stats’, which is of non-class type ‘int’
         52 |         total_lengths += stats.back().second;
            |                                ^~~~
      error: command '/usr/bin/gcc' failed with exit code 1
      [end of output]
  
  note: This error originates from a subprocess, and is likely not a problem with pip.
  ERROR: Failed building wheel for fastwer
  Running setup.py clean for fastwer
Failed to build fastwer
ERROR: Could not build wheels for fastwer, which is required to install pyproject.toml-based projects

[Dan1chu]

Try to add #include <cstdint> in fastwer/src/fastwer.hpp at the top of code.