Quality measure for sequence to structure annotations
Since StructMAn combines the results from many different structural annotations, we need a measure for the quality of a protein sequence to structure annotation. This measure includes three parameters:
- The sequence identity (S) of the alignment of the given input protein sequence and the sequence of the backbone of the annotated structure.
- The coverage (C) of the same alignment.
- The atomic resolution (R) of the annotated structure.
The quality measure is then calculated using the following formula:
