From e2ecfa5c778e636f2e4fdde95fc685ba04563f53 Mon Sep 17 00:00:00 2001 From: Aaron Trowbridge Date: Mon, 19 Aug 2024 21:44:14 -0400 Subject: [PATCH] v0.2.0: manifest updates + reexport LinearAlgebra --- Manifest.toml | 694 +++++++++++++++++++++---------------------------- Project.toml | 11 +- src/Piccolo.jl | 1 + 3 files changed, 297 insertions(+), 409 deletions(-) diff --git a/Manifest.toml b/Manifest.toml index d968556..520c068 100644 --- a/Manifest.toml +++ b/Manifest.toml @@ -1,13 +1,21 @@ # This file is machine-generated - editing it directly is not advised -julia_version = "1.10.1" +julia_version = "1.10.3" manifest_format = "2.0" -project_hash = "7885bca7784883f3adcabc0fcf67f23072c28752" +project_hash = "748c2e32621def2dcd782c4503ffa03c947c1b13" [[deps.ADTypes]] -git-tree-sha1 = "016833eb52ba2d6bea9fcb50ca295980e728ee24" +git-tree-sha1 = "99a6f5d0ce1c7c6afdb759daa30226f71c54f6b0" uuid = "47edcb42-4c32-4615-8424-f2b9edc5f35b" -version = "0.2.7" +version = "1.7.1" + + [deps.ADTypes.extensions] + ADTypesChainRulesCoreExt = "ChainRulesCore" + ADTypesEnzymeCoreExt = "EnzymeCore" + + [deps.ADTypes.weakdeps] + ChainRulesCore = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" + EnzymeCore = "f151be2c-9106-41f4-ab19-57ee4f262869" [[deps.ASL_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -15,6 +23,29 @@ git-tree-sha1 = "6252039f98492252f9e47c312c8ffda0e3b9e78d" uuid = "ae81ac8f-d209-56e5-92de-9978fef736f9" version = "0.1.3+0" +[[deps.AbstractDifferentiation]] +deps = ["ExprTools", "LinearAlgebra", "Requires"] +git-tree-sha1 = "643373e6a3d4c180a3487abd91f689e3812b1274" +uuid = "c29ec348-61ec-40c8-8164-b8c60e9d9f3d" +version = "0.5.3" + + [deps.AbstractDifferentiation.extensions] + AbstractDifferentiationChainRulesCoreExt = "ChainRulesCore" + AbstractDifferentiationFiniteDifferencesExt = "FiniteDifferences" + AbstractDifferentiationForwardDiffExt = ["DiffResults", "ForwardDiff"] + AbstractDifferentiationReverseDiffExt = ["DiffResults", "ReverseDiff"] + AbstractDifferentiationTrackerExt = "Tracker" + AbstractDifferentiationZygoteExt = "Zygote" + + [deps.AbstractDifferentiation.weakdeps] + ChainRulesCore = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" + DiffResults = "163ba53b-c6d8-5494-b064-1a9d43ac40c5" + FiniteDifferences = "26cc04aa-876d-5657-8c51-4c34ba976000" + ForwardDiff = "f6369f11-7733-5829-9624-2563aa707210" + ReverseDiff = "37e2e3b7-166d-5795-8a7a-e32c996b4267" + Tracker = "9f7883ad-71c0-57eb-9f7f-b5c9e6d3789c" + Zygote = "e88e6eb3-aa80-5325-afca-941959d7151f" + [[deps.AbstractFFTs]] deps = ["LinearAlgebra"] git-tree-sha1 = "d92ad398961a3ed262d8bf04a1a2b8340f915fef" @@ -26,11 +57,6 @@ weakdeps = ["ChainRulesCore", "Test"] AbstractFFTsChainRulesCoreExt = "ChainRulesCore" AbstractFFTsTestExt = "Test" -[[deps.AbstractLattices]] -git-tree-sha1 = "222ee9e50b98f51b5d78feb93dd928880df35f06" -uuid = "398f06c4-4d28-53ec-89ca-5b2656b7603d" -version = "0.3.0" - [[deps.AbstractTrees]] git-tree-sha1 = "2d9c9a55f9c93e8887ad391fbae72f8ef55e1177" uuid = "1520ce14-60c1-5f80-bbc7-55ef81b5835c" @@ -38,9 +64,9 @@ version = "0.4.5" [[deps.Accessors]] deps = ["CompositionsBase", "ConstructionBase", "Dates", "InverseFunctions", "LinearAlgebra", "MacroTools", "Markdown", "Test"] -git-tree-sha1 = "c0d491ef0b135fd7d63cbc6404286bc633329425" +git-tree-sha1 = "f61b15be1d76846c0ce31d3fcfac5380ae53db6a" uuid = "7d9f7c33-5ae7-4f3b-8dc6-eff91059b697" -version = "0.1.36" +version = "0.1.37" [deps.Accessors.extensions] AccessorsAxisKeysExt = "AxisKeys" @@ -67,11 +93,16 @@ weakdeps = ["StaticArrays"] [deps.Adapt.extensions] AdaptStaticArraysExt = "StaticArrays" +[[deps.AdaptivePredicates]] +git-tree-sha1 = "7d5da5dd472490d048b081ca1bda4a7821b06456" +uuid = "35492f91-a3bd-45ad-95db-fcad7dcfedb7" +version = "1.1.1" + [[deps.AliasTables]] -deps = ["Random"] -git-tree-sha1 = "82b912bb5215792fd33df26f407d064d3602af98" +deps = ["PtrArrays", "Random"] +git-tree-sha1 = "9876e1e164b144ca45e9e3198d0b689cadfed9ff" uuid = "66dad0bd-aa9a-41b7-9441-69ab47430ed8" -version = "1.1.2" +version = "1.1.3" [[deps.Animations]] deps = ["Colors"] @@ -84,10 +115,10 @@ uuid = "0dad84c5-d112-42e6-8d28-ef12dabb789f" version = "1.1.1" [[deps.ArrayInterface]] -deps = ["Adapt", "LinearAlgebra", "SparseArrays", "SuiteSparse"] -git-tree-sha1 = "133a240faec6e074e07c31ee75619c90544179cf" +deps = ["Adapt", "LinearAlgebra"] +git-tree-sha1 = "f54c23a5d304fb87110de62bace7777d59088c34" uuid = "4fba245c-0d91-5ea0-9b3e-6abc04ee57a9" -version = "7.10.0" +version = "7.15.0" [deps.ArrayInterface.extensions] ArrayInterfaceBandedMatricesExt = "BandedMatrices" @@ -97,6 +128,7 @@ version = "7.10.0" ArrayInterfaceChainRulesExt = "ChainRules" ArrayInterfaceGPUArraysCoreExt = "GPUArraysCore" ArrayInterfaceReverseDiffExt = "ReverseDiff" + ArrayInterfaceSparseArraysExt = "SparseArrays" ArrayInterfaceStaticArraysCoreExt = "StaticArraysCore" ArrayInterfaceTrackerExt = "Tracker" @@ -108,6 +140,7 @@ version = "7.10.0" ChainRules = "082447d4-558c-5d27-93f4-14fc19e9eca2" GPUArraysCore = "46192b85-c4d5-4398-a991-12ede77f4527" ReverseDiff = "37e2e3b7-166d-5795-8a7a-e32c996b4267" + SparseArrays = "2f01184e-e22b-5df5-ae63-d93ebab69eaf" StaticArraysCore = "1e83bf80-4336-4d27-bf5d-d5a4f845583c" Tracker = "9f7883ad-71c0-57eb-9f7f-b5c9e6d3789c" @@ -116,9 +149,9 @@ uuid = "56f22d72-fd6d-98f1-02f0-08ddc0907c33" [[deps.Automa]] deps = ["PrecompileTools", "TranscodingStreams"] -git-tree-sha1 = "588e0d680ad1d7201d4c6a804dcb1cd9cba79fbb" +git-tree-sha1 = "014bc22d6c400a7703c0f5dc1fdc302440cf88be" uuid = "67c07d97-cdcb-5c2c-af73-a7f9c32a568b" -version = "1.0.3" +version = "1.0.4" [[deps.AxisAlgorithms]] deps = ["LinearAlgebra", "Random", "SparseArrays", "WoodburyMatrices"] @@ -142,9 +175,9 @@ uuid = "6e4b80f9-dd63-53aa-95a3-0cdb28fa8baf" version = "1.5.0" [[deps.Bijections]] -git-tree-sha1 = "c9b163bd832e023571e86d0b90d9de92a9879088" +git-tree-sha1 = "95f5c7e2d177b7ba1a240b0518038b975d72a8c0" uuid = "e2ed5e7c-b2de-5872-ae92-c73ca462fb04" -version = "0.1.6" +version = "0.1.7" [[deps.Bzip2_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -168,55 +201,43 @@ version = "1.0.1+0" [[deps.Cairo]] deps = ["Cairo_jll", "Colors", "Glib_jll", "Graphics", "Libdl", "Pango_jll"] -git-tree-sha1 = "d0b3f8b4ad16cb0a2988c6788646a5e6a17b6b1b" +git-tree-sha1 = "7b6ad8c35f4bc3bca8eb78127c8b99719506a5fb" uuid = "159f3aea-2a34-519c-b102-8c37f9878175" -version = "1.0.5" +version = "1.1.0" [[deps.CairoMakie]] -deps = ["Base64", "Cairo", "Colors", "FFTW", "FileIO", "FreeType", "GeometryBasics", "LinearAlgebra", "Makie", "PrecompileTools", "SHA"] -git-tree-sha1 = "5e21a254d82c64b1a4ed9dbdc7e87c5d9cf4a686" +deps = ["CRC32c", "Cairo", "Colors", "FileIO", "FreeType", "GeometryBasics", "LinearAlgebra", "Makie", "PrecompileTools"] +git-tree-sha1 = "d69c7593fe9d7d617973adcbe4762028c6899b2c" uuid = "13f3f980-e62b-5c42-98c6-ff1f3baf88f0" -version = "0.10.12" +version = "0.11.11" [[deps.Cairo_jll]] deps = ["Artifacts", "Bzip2_jll", "CompilerSupportLibraries_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "JLLWrappers", "LZO_jll", "Libdl", "Pixman_jll", "Xorg_libXext_jll", "Xorg_libXrender_jll", "Zlib_jll", "libpng_jll"] -git-tree-sha1 = "a4c43f59baa34011e303e76f5c8c91bf58415aaf" +git-tree-sha1 = "a2f1c8c668c8e3cb4cca4e57a8efdb09067bb3fd" uuid = "83423d85-b0ee-5818-9007-b63ccbeb887a" -version = "1.18.0+1" - -[[deps.Calculus]] -deps = ["LinearAlgebra"] -git-tree-sha1 = "f641eb0a4f00c343bbc32346e1217b86f3ce9dad" -uuid = "49dc2e85-a5d0-5ad3-a950-438e2897f1b9" -version = "0.5.1" +version = "1.18.0+2" [[deps.ChainRulesCore]] deps = ["Compat", "LinearAlgebra"] -git-tree-sha1 = "575cd02e080939a33b6df6c5853d14924c08e35b" +git-tree-sha1 = "71acdbf594aab5bbb2cec89b208c41b4c411e49f" uuid = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" -version = "1.23.0" +version = "1.24.0" weakdeps = ["SparseArrays"] [deps.ChainRulesCore.extensions] ChainRulesCoreSparseArraysExt = "SparseArrays" -[[deps.CodeTracking]] -deps = ["InteractiveUtils", "UUIDs"] -git-tree-sha1 = "c0216e792f518b39b22212127d4a84dc31e4e386" -uuid = "da1fd8a2-8d9e-5ec2-8556-3022fb5608a2" -version = "1.3.5" - [[deps.CodecBzip2]] -deps = ["Bzip2_jll", "Libdl", "TranscodingStreams"] -git-tree-sha1 = "9b1ca1aa6ce3f71b3d1840c538a8210a043625eb" +deps = ["Bzip2_jll", "TranscodingStreams"] +git-tree-sha1 = "e7c529cc31bb85b97631b922fa2e6baf246f5905" uuid = "523fee87-0ab8-5b00-afb7-3ecf72e48cfd" -version = "0.8.2" +version = "0.8.4" [[deps.CodecZlib]] deps = ["TranscodingStreams", "Zlib_jll"] -git-tree-sha1 = "59939d8a997469ee05c4b4944560a820f9ba0d73" +git-tree-sha1 = "bce6804e5e6044c6daab27bb533d1295e4a2e759" uuid = "944b1d66-785c-5afd-91f1-9de20f533193" -version = "0.7.4" +version = "0.7.6" [[deps.ColorBrewer]] deps = ["Colors", "JSON", "Test"] @@ -226,9 +247,9 @@ version = "0.4.0" [[deps.ColorSchemes]] deps = ["ColorTypes", "ColorVectorSpace", "Colors", "FixedPointNumbers", "PrecompileTools", "Random"] -git-tree-sha1 = "67c1f244b991cad9b0aa4b7540fb758c2488b129" +git-tree-sha1 = "b5278586822443594ff615963b0c09755771b3e0" uuid = "35d6a980-a343-548e-a6ea-1d62b119f2f4" -version = "3.24.0" +version = "3.26.0" [[deps.ColorTypes]] deps = ["FixedPointNumbers", "Random"] @@ -248,9 +269,9 @@ weakdeps = ["SpecialFunctions"] [[deps.Colors]] deps = ["ColorTypes", "FixedPointNumbers", "Reexport"] -git-tree-sha1 = "fc08e5930ee9a4e03f84bfb5211cb54e7769758a" +git-tree-sha1 = "362a287c3aa50601b0bc359053d5c2468f0e7ce0" uuid = "5ae59095-9a9b-59fe-a467-6f913c188581" -version = "0.12.10" +version = "0.12.11" [[deps.Combinatorics]] git-tree-sha1 = "08c8b6831dc00bfea825826be0bc8336fc369860" @@ -268,11 +289,16 @@ git-tree-sha1 = "7b8a93dba8af7e3b42fecabf646260105ac373f7" uuid = "bbf7d656-a473-5ed7-a52c-81e309532950" version = "0.3.0" +[[deps.CommonWorldInvalidations]] +git-tree-sha1 = "ae52d1c52048455e85a387fbee9be553ec2b68d0" +uuid = "f70d9fcc-98c5-4d4a-abd7-e4cdeebd8ca8" +version = "1.0.0" + [[deps.Compat]] deps = ["TOML", "UUIDs"] -git-tree-sha1 = "b1c55339b7c6c350ee89f2c1604299660525b248" +git-tree-sha1 = "8ae8d32e09f0dcf42a36b90d4e17f5dd2e4c4215" uuid = "34da2185-b29b-5c13-b0c7-acf172513d20" -version = "4.15.0" +version = "4.16.0" weakdeps = ["Dates", "LinearAlgebra"] [deps.Compat.extensions] @@ -281,7 +307,7 @@ weakdeps = ["Dates", "LinearAlgebra"] [[deps.CompilerSupportLibraries_jll]] deps = ["Artifacts", "Libdl"] uuid = "e66e0078-7015-5450-92f7-15fbd957f2ae" -version = "1.1.0+0" +version = "1.1.1+0" [[deps.CompositeTypes]] git-tree-sha1 = "bce26c3dab336582805503bed209faab1c279768" @@ -299,15 +325,15 @@ weakdeps = ["InverseFunctions"] [[deps.Conda]] deps = ["Downloads", "JSON", "VersionParsing"] -git-tree-sha1 = "51cab8e982c5b598eea9c8ceaced4b58d9dd37c9" +git-tree-sha1 = "b19db3927f0db4151cb86d073689f2428e524576" uuid = "8f4d0f93-b110-5947-807f-2305c1781a2d" -version = "1.10.0" +version = "1.10.2" [[deps.ConstructionBase]] deps = ["LinearAlgebra"] -git-tree-sha1 = "260fd2400ed2dab602a7c15cf10c1933c59930a2" +git-tree-sha1 = "a33b7ced222c6165f624a3f2b55945fac5a598d9" uuid = "187b0558-2788-49d3-abe0-74a17ed4e7c9" -version = "1.5.5" +version = "1.5.7" weakdeps = ["IntervalSets", "StaticArrays"] [deps.ConstructionBase.extensions] @@ -340,10 +366,10 @@ deps = ["Printf"] uuid = "ade2ca70-3891-5945-98fb-dc099432e06a" [[deps.DelaunayTriangulation]] -deps = ["DataStructures", "EnumX", "ExactPredicates", "Random", "SimpleGraphs"] -git-tree-sha1 = "d4e9dc4c6106b8d44e40cd4faf8261a678552c7c" +deps = ["AdaptivePredicates", "EnumX", "ExactPredicates", "Random"] +git-tree-sha1 = "b5f1c6532d2ea71e99b74231b0a3d53fba846ced" uuid = "927a84f5-c5f4-47a5-9785-b46e178433df" -version = "0.8.12" +version = "1.1.3" [[deps.DiffResults]] deps = ["StaticArraysCore"] @@ -363,9 +389,9 @@ uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b" [[deps.Distributions]] deps = ["AliasTables", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SpecialFunctions", "Statistics", "StatsAPI", "StatsBase", "StatsFuns"] -git-tree-sha1 = "22c595ca4146c07b16bcf9c8bea86f731f7109d2" +git-tree-sha1 = "0e0a1264b0942f1f3abb2b30891f2a590cc652ac" uuid = "31c24e10-a181-5473-b8eb-7969acd0382f" -version = "0.25.108" +version = "0.25.110" [deps.Distributions.extensions] DistributionsChainRulesCoreExt = "ChainRulesCore" @@ -385,9 +411,9 @@ version = "0.9.3" [[deps.DomainSets]] deps = ["CompositeTypes", "IntervalSets", "LinearAlgebra", "Random", "StaticArrays"] -git-tree-sha1 = "f300614d950439b5501e4198b0440c7e8b511894" +git-tree-sha1 = "490392af2c7d63183bfa2c8aaa6ab981c5ba7561" uuid = "5b8099bc-c8ec-5219-889f-1d9e522a28bf" -version = "0.7.13" +version = "0.7.14" weakdeps = ["Makie"] [deps.DomainSets.extensions] @@ -398,12 +424,6 @@ deps = ["ArgTools", "FileWatching", "LibCURL", "NetworkOptions"] uuid = "f43a241f-c20a-4ad4-852c-f6b1247861c6" version = "1.6.0" -[[deps.DualNumbers]] -deps = ["Calculus", "NaNMath", "SpecialFunctions"] -git-tree-sha1 = "5837a837389fccf076445fce071c8ddaea35a566" -uuid = "fa6b7ba4-c1ee-5f82-b5fc-ecf0adba8f74" -version = "0.6.8" - [[deps.DynamicPolynomials]] deps = ["Future", "LinearAlgebra", "MultivariatePolynomials", "MutableArithmetics", "Pkg", "Reexport", "Test"] git-tree-sha1 = "30a1848c4f4fc35d1d4bbbd125650f6a11b5bc6c" @@ -439,15 +459,27 @@ git-tree-sha1 = "1c6317308b9dc757616f0b5cb379db10494443a7" uuid = "2e619515-83b5-522b-bb60-26c02a35a201" version = "2.6.2+0" +[[deps.ExponentialAction]] +deps = ["AbstractDifferentiation", "ChainRulesCore", "LinearAlgebra", "SparseArrays"] +git-tree-sha1 = "f09115e954f495cab57771b30a31b06b04e79d31" +uuid = "e24c0720-ea99-47e8-929e-571b494574d3" +version = "0.2.9" + [[deps.ExprTools]] git-tree-sha1 = "27415f162e6028e81c72b82ef756bf321213b6ec" uuid = "e2ba6199-217a-4e67-a87a-7c52f15ade04" version = "0.1.10" +[[deps.Expronicon]] +deps = ["MLStyle", "Pkg", "TOML"] +git-tree-sha1 = "fc3951d4d398b5515f91d7fe5d45fc31dccb3c9b" +uuid = "6b7a57c9-7cc1-4fdf-b7f5-e857abae3636" +version = "0.8.5" + [[deps.Extents]] -git-tree-sha1 = "2140cd04483da90b2da7f99b2add0750504fc39c" +git-tree-sha1 = "94997910aca72897524d2237c41eb852153b0f65" uuid = "411431e0-e8b7-467b-b5e0-f676ba4f2910" -version = "0.1.2" +version = "0.1.3" [[deps.FFMPEG_jll]] deps = ["Artifacts", "Bzip2_jll", "FreeType2_jll", "FriBidi_jll", "JLLWrappers", "LAME_jll", "Libdl", "Ogg_jll", "OpenSSL_jll", "Opus_jll", "PCRE2_jll", "Zlib_jll", "libaom_jll", "libass_jll", "libfdk_aac_jll", "libvorbis_jll", "x264_jll", "x265_jll"] @@ -473,14 +505,26 @@ git-tree-sha1 = "82d8afa92ecf4b52d78d869f038ebfb881267322" uuid = "5789e2e9-d7fb-5bc7-8068-2c6fae9b9549" version = "1.16.3" +[[deps.FilePaths]] +deps = ["FilePathsBase", "MacroTools", "Reexport", "Requires"] +git-tree-sha1 = "919d9412dbf53a2e6fe74af62a73ceed0bce0629" +uuid = "8fc22ac5-c921-52a6-82fd-178b2807b824" +version = "0.8.3" + +[[deps.FilePathsBase]] +deps = ["Compat", "Dates", "Mmap", "Printf", "Test", "UUIDs"] +git-tree-sha1 = "9f00e42f8d99fdde64d40c8ea5d14269a2e2c1aa" +uuid = "48062228-2e41-5def-b9a4-89aafe57970f" +version = "0.9.21" + [[deps.FileWatching]] uuid = "7b1f6079-737a-58dc-b8bc-7a2ca5c1b5ee" [[deps.FillArrays]] deps = ["LinearAlgebra"] -git-tree-sha1 = "0653c0a2396a6da5bc4766c43041ef5fd3efbe57" +git-tree-sha1 = "fd0002c0b5362d7eb952450ad5eb742443340d6e" uuid = "1a297f60-69ca-5386-bcde-b61e274b549b" -version = "1.11.0" +version = "1.12.0" weakdeps = ["PDMats", "SparseArrays", "Statistics"] [deps.FillArrays.extensions] @@ -488,27 +532,11 @@ weakdeps = ["PDMats", "SparseArrays", "Statistics"] FillArraysSparseArraysExt = "SparseArrays" FillArraysStatisticsExt = "Statistics" -[[deps.FiniteDiff]] -deps = ["ArrayInterface", "LinearAlgebra", "Requires", "Setfield", "SparseArrays"] -git-tree-sha1 = "2de436b72c3422940cbe1367611d137008af7ec3" -uuid = "6a86dc24-6348-571c-b903-95158fe2bd41" -version = "2.23.1" - - [deps.FiniteDiff.extensions] - FiniteDiffBandedMatricesExt = "BandedMatrices" - FiniteDiffBlockBandedMatricesExt = "BlockBandedMatrices" - FiniteDiffStaticArraysExt = "StaticArrays" - - [deps.FiniteDiff.weakdeps] - BandedMatrices = "aae01518-5342-5314-be14-df237901396f" - BlockBandedMatrices = "ffab5731-97b5-5995-9138-79e8c1846df0" - StaticArrays = "90137ffa-7385-5640-81b9-e52037218182" - [[deps.FixedPointNumbers]] deps = ["Statistics"] -git-tree-sha1 = "335bfdceacc84c5cdf16aadc768aa5ddfc5383cc" +git-tree-sha1 = "05882d6995ae5c12bb5f36dd2ed3f61c98cbb172" uuid = "53c48c17-4a7d-5ca2-90c5-79b7896eea93" -version = "0.8.4" +version = "0.8.5" [[deps.Fontconfig_jll]] deps = ["Artifacts", "Bzip2_jll", "Expat_jll", "FreeType2_jll", "JLLWrappers", "Libdl", "Libuuid_jll", "Zlib_jll"] @@ -521,12 +549,6 @@ git-tree-sha1 = "9c68794ef81b08086aeb32eeaf33531668d5f5fc" uuid = "1fa38f19-a742-5d3f-a2b9-30dd87b9d5f8" version = "1.3.7" -[[deps.Formatting]] -deps = ["Logging", "Printf"] -git-tree-sha1 = "fb409abab2caf118986fc597ba84b50cbaf00b87" -uuid = "59287772-0a20-5a39-b81b-1366585eb4c0" -version = "0.4.3" - [[deps.ForwardDiff]] deps = ["CommonSubexpressions", "DiffResults", "DiffRules", "LinearAlgebra", "LogExpFunctions", "NaNMath", "Preferences", "Printf", "Random", "SpecialFunctions"] git-tree-sha1 = "cf0fe81336da9fb90944683b8c41984b08793dad" @@ -545,9 +567,9 @@ version = "4.1.1" [[deps.FreeType2_jll]] deps = ["Artifacts", "Bzip2_jll", "JLLWrappers", "Libdl", "Zlib_jll"] -git-tree-sha1 = "d8db6a5a2fe1381c1ea4ef2cab7c69c2de7f9ea0" +git-tree-sha1 = "5c1d8ae0efc6c2e7b1fc502cbe25def8f661b7bc" uuid = "d7e528f0-a631-5988-bf34-fe36492bcfd7" -version = "2.13.1+0" +version = "2.13.2+0" [[deps.FreeTypeAbstraction]] deps = ["ColorVectorSpace", "Colors", "FreeType", "GeometryBasics"] @@ -584,9 +606,9 @@ version = "0.1.6" [[deps.GeoInterface]] deps = ["Extents"] -git-tree-sha1 = "801aef8228f7f04972e596b09d4dba481807c913" +git-tree-sha1 = "9fff8990361d5127b770e3454488360443019bb3" uuid = "cf35fbd7-0cd7-5166-be24-54bfbe79505f" -version = "1.3.4" +version = "1.3.5" [[deps.GeometryBasics]] deps = ["EarCut_jll", "Extents", "GeoInterface", "IterTools", "LinearAlgebra", "StaticArrays", "StructArrays", "Tables"] @@ -602,9 +624,9 @@ version = "0.21.0+0" [[deps.Glib_jll]] deps = ["Artifacts", "Gettext_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Libiconv_jll", "Libmount_jll", "PCRE2_jll", "Zlib_jll"] -git-tree-sha1 = "359a1ba2e320790ddbe4ee8b4d54a305c0ea2aff" +git-tree-sha1 = "7c82e6a6cd34e9d935e9aa4051b66c6ff3af59ba" uuid = "7746bdde-850d-59dc-9ae8-88ece973131d" -version = "2.80.0+0" +version = "2.80.2+0" [[deps.Graphics]] deps = ["Colors", "LinearAlgebra", "NaNMath"] @@ -620,9 +642,9 @@ version = "1.3.14+0" [[deps.GridLayoutBase]] deps = ["GeometryBasics", "InteractiveUtils", "Observables"] -git-tree-sha1 = "f57a64794b336d4990d90f80b147474b869b1bc4" +git-tree-sha1 = "6f93a83ca11346771a93bbde2bdad2f65b61498f" uuid = "3955a311-db13-416c-9275-1d80ed98e5e9" -version = "0.9.2" +version = "0.10.2" [[deps.Grisu]] git-tree-sha1 = "53bb909d1151e57e2484c3d1b53e19552b887fb2" @@ -637,21 +659,21 @@ version = "2.8.1+1" [[deps.Hwloc_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "ca0f6bf568b4bfc807e7537f081c81e35ceca114" +git-tree-sha1 = "5e19e1e4fa3e71b774ce746274364aef0234634e" uuid = "e33a78d0-f292-5ffc-b300-72abe9b543c8" -version = "2.10.0+0" +version = "2.11.1+0" [[deps.HypergeometricFunctions]] -deps = ["DualNumbers", "LinearAlgebra", "OpenLibm_jll", "SpecialFunctions"] -git-tree-sha1 = "f218fe3736ddf977e0e772bc9a586b2383da2685" +deps = ["LinearAlgebra", "OpenLibm_jll", "SpecialFunctions"] +git-tree-sha1 = "7c4195be1649ae622304031ed46a2f4df989f1eb" uuid = "34004b35-14d8-5ef3-9330-4cdb6864b03a" -version = "0.3.23" +version = "0.3.24" [[deps.IJulia]] deps = ["Base64", "Conda", "Dates", "InteractiveUtils", "JSON", "Libdl", "Logging", "Markdown", "MbedTLS", "Pkg", "Printf", "REPL", "Random", "SoftGlobalScope", "Test", "UUIDs", "ZMQ"] -git-tree-sha1 = "47ac8cc196b81001a711f4b2c12c97372338f00c" +git-tree-sha1 = "1702f79fa30f56b68d5b2fd6fb3a9a14ff6f9130" uuid = "7073ff75-c697-5162-941a-fcdaad2a7d2a" -version = "1.24.2" +version = "1.25.0" [[deps.IfElse]] git-tree-sha1 = "debdd00ffef04665ccbb3e150747a77560e8fad1" @@ -678,9 +700,9 @@ version = "0.10.2" [[deps.ImageIO]] deps = ["FileIO", "IndirectArrays", "JpegTurbo", "LazyModules", "Netpbm", "OpenEXR", "PNGFiles", "QOI", "Sixel", "TiffImages", "UUIDs"] -git-tree-sha1 = "bca20b2f5d00c4fbc192c3212da8fa79f4688009" +git-tree-sha1 = "437abb322a41d527c197fa800455f79d414f0a3c" uuid = "82e4d734-157c-48bb-816b-45c225c6df19" -version = "0.6.7" +version = "0.6.8" [[deps.ImageMetadata]] deps = ["AxisArrays", "ImageAxes", "ImageBase", "ImageCore"] @@ -700,20 +722,15 @@ uuid = "9b13fd28-a010-5f03-acff-a1bbcff69959" version = "1.0.0" [[deps.Inflate]] -git-tree-sha1 = "ea8031dea4aff6bd41f1df8f2fdfb25b33626381" +git-tree-sha1 = "d1b1b796e47d94588b3757fe84fbf65a5ec4a80d" uuid = "d25df0c9-e2be-5dd7-82c8-3ad0b3e990b9" -version = "0.1.4" - -[[deps.IntegerMathUtils]] -git-tree-sha1 = "b8ffb903da9f7b8cf695a8bead8e01814aa24b30" -uuid = "18e54dd8-cb9d-406c-a71d-865a43cbb235" -version = "0.1.2" +version = "0.1.5" [[deps.IntelOpenMP_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "be50fe8df3acbffa0274a744f1a99d29c45a57f4" +git-tree-sha1 = "14eb2b542e748570b56446f4c50fbfb2306ebc45" uuid = "1d5cc7b8-4909-519e-a0f8-d0f5ad9712d0" -version = "2024.1.0+0" +version = "2024.2.0+0" [[deps.InteractiveUtils]] deps = ["Markdown"] @@ -733,9 +750,9 @@ version = "0.15.1" [[deps.IntervalArithmetic]] deps = ["CRlibm_jll", "MacroTools", "RoundingEmulator"] -git-tree-sha1 = "23ddd329f4a2a65c7a55b91553b60849bd038575" +git-tree-sha1 = "433b0bb201cd76cb087b017e49244f10394ebe9c" uuid = "d1acc4aa-44c8-5952-acd4-ba5d80a2a253" -version = "0.22.11" +version = "0.22.14" weakdeps = ["DiffRules", "ForwardDiff", "RecipesBase"] [deps.IntervalArithmetic.extensions] @@ -755,26 +772,26 @@ weakdeps = ["Random", "RecipesBase", "Statistics"] IntervalSetsStatisticsExt = "Statistics" [[deps.InverseFunctions]] -deps = ["Test"] -git-tree-sha1 = "e7cbed5032c4c397a6ac23d1493f3289e01231c4" +git-tree-sha1 = "2787db24f4e03daf859c6509ff87764e4182f7d1" uuid = "3587e190-3f89-42d0-90ee-14403ec27112" -version = "0.1.14" -weakdeps = ["Dates"] +version = "0.1.16" +weakdeps = ["Dates", "Test"] [deps.InverseFunctions.extensions] - DatesExt = "Dates" + InverseFunctionsDatesExt = "Dates" + InverseFunctionsTestExt = "Test" [[deps.Ipopt]] deps = ["Ipopt_jll", "LinearAlgebra", "MathOptInterface", "OpenBLAS32_jll", "PrecompileTools"] -git-tree-sha1 = "3cb39c81e713245d61de9d2aafa53489e3ab6e9b" +git-tree-sha1 = "92588db78296190d27668a560df3997719fc2a25" uuid = "b6b21f68-93f8-5de0-b562-5493be1d77c9" -version = "1.6.2" +version = "1.6.6" [[deps.Ipopt_jll]] deps = ["ASL_jll", "Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "MUMPS_seq_jll", "SPRAL_jll", "libblastrampoline_jll"] -git-tree-sha1 = "546c40fd3718c65d48296dd6cec98af9904e3ca4" +git-tree-sha1 = "a0950d209a055b3adb6d29ade5cbdf005a6bd290" uuid = "9cc047cb-c261-5740-88fc-0cf96f7bdcc7" -version = "300.1400.1400+0" +version = "300.1400.1600+0" [[deps.IrrationalConstants]] git-tree-sha1 = "630b497eafcc20001bba38a4651b327dcfc491d2" @@ -798,10 +815,10 @@ uuid = "82899510-4779-5014-852e-03e436cf321d" version = "1.0.0" [[deps.JLD2]] -deps = ["FileIO", "MacroTools", "Mmap", "OrderedCollections", "Pkg", "PrecompileTools", "Printf", "Reexport", "Requires", "TranscodingStreams", "UUIDs"] -git-tree-sha1 = "5ea6acdd53a51d897672edb694e3cc2912f3f8a7" +deps = ["FileIO", "MacroTools", "Mmap", "OrderedCollections", "PrecompileTools", "Reexport", "Requires", "TranscodingStreams", "UUIDs", "Unicode"] +git-tree-sha1 = "67d4690d32c22e28818a434b293a374cc78473d3" uuid = "033835bb-8acc-5ee8-8aae-3f567f8a3819" -version = "0.4.46" +version = "0.4.51" [[deps.JLLWrappers]] deps = ["Artifacts", "Preferences"] @@ -823,15 +840,9 @@ version = "0.1.5" [[deps.JpegTurbo_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "3336abae9a713d2210bb57ab484b1e065edd7d23" +git-tree-sha1 = "c84a835e1a09b289ffcd2271bf2a337bbdda6637" uuid = "aacddb02-875f-59d6-b918-886e6ef4fbf8" -version = "3.0.2+0" - -[[deps.JuliaInterpreter]] -deps = ["CodeTracking", "InteractiveUtils", "Random", "UUIDs"] -git-tree-sha1 = "e9648d90370e2d0317f9518c9c6e0841db54a90b" -uuid = "aa1ae85d-cabe-5617-a682-6adf51b2e16a" -version = "0.9.31" +version = "3.0.3+0" [[deps.KernelDensity]] deps = ["Distributions", "DocStringExtensions", "FFTW", "Interpolations", "StatsBase"] @@ -847,9 +858,9 @@ version = "3.100.2+0" [[deps.LLVMOpenMP_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "d986ce2d884d49126836ea94ed5bfb0f12679713" +git-tree-sha1 = "e16271d212accd09d52ee0ae98956b8a05c4b626" uuid = "1d63c593-3942-5779-bab2-d838dc0a180e" -version = "15.0.7+0" +version = "17.0.6+0" [[deps.LZO_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] @@ -875,16 +886,18 @@ version = "0.4.6" [[deps.Latexify]] deps = ["Format", "InteractiveUtils", "LaTeXStrings", "MacroTools", "Markdown", "OrderedCollections", "Requires"] -git-tree-sha1 = "e0b5cd21dc1b44ec6e64f351976f961e6f31d6c4" +git-tree-sha1 = "ce5f5621cac23a86011836badfedf664a612cee4" uuid = "23fbe1c1-3f47-55db-b15f-69d7ec21a316" -version = "0.16.3" +version = "0.16.5" [deps.Latexify.extensions] DataFramesExt = "DataFrames" + SparseArraysExt = "SparseArrays" SymEngineExt = "SymEngine" [deps.Latexify.weakdeps] DataFrames = "a93c6f00-e57d-5684-b7b6-d8193f3e46c0" + SparseArrays = "2f01184e-e22b-5df5-ae63-d93ebab69eaf" SymEngine = "123dc426-2d89-5057-bbad-38513e3affd8" [[deps.LazyArtifacts]] @@ -949,43 +962,25 @@ version = "1.17.0+0" [[deps.Libmount_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "4b683b19157282f50bfd5dcaa2efe5295814ea22" +git-tree-sha1 = "0c4f9c4f1a50d8f35048fa0532dabbadf702f81e" uuid = "4b2f31a3-9ecc-558c-b454-b3730dcb73e9" -version = "2.40.0+0" +version = "2.40.1+0" [[deps.Libuuid_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "27fd5cc10be85658cacfe11bb81bee216af13eda" +git-tree-sha1 = "5ee6203157c120d79034c748a2acba45b82b8807" uuid = "38a345b3-de98-5d2b-a5d3-14cd9215e700" -version = "2.40.0+0" - -[[deps.LightXML]] -deps = ["Libdl", "XML2_jll"] -git-tree-sha1 = "3a994404d3f6709610701c7dabfc03fed87a81f8" -uuid = "9c8b4983-aa76-5018-a973-4c85ecc9e179" -version = "0.9.1" - -[[deps.LineSearches]] -deps = ["LinearAlgebra", "NLSolversBase", "NaNMath", "Parameters", "Printf"] -git-tree-sha1 = "7bbea35cec17305fc70a0e5b4641477dc0789d9d" -uuid = "d3d80556-e9d4-5f37-9878-2ab0fcc64255" -version = "7.2.0" +version = "2.40.1+0" [[deps.LinearAlgebra]] deps = ["Libdl", "OpenBLAS_jll", "libblastrampoline_jll"] uuid = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e" -[[deps.LinearAlgebraX]] -deps = ["LinearAlgebra", "Mods", "Primes", "SimplePolynomials"] -git-tree-sha1 = "d76cec8007ec123c2b681269d40f94b053473fcf" -uuid = "9b3f67b0-2d00-526e-9884-9e4938f8fb88" -version = "0.2.7" - [[deps.LogExpFunctions]] deps = ["DocStringExtensions", "IrrationalConstants", "LinearAlgebra"] -git-tree-sha1 = "18144f3e9cbe9b15b070288eef858f71b291ce37" +git-tree-sha1 = "a2d09619db4e765091ee5c6ffe8872849de0feea" uuid = "2ab3a3ac-af41-5b50-aa03-7779005ae688" -version = "0.3.27" +version = "0.3.28" [deps.LogExpFunctions.extensions] LogExpFunctionsChainRulesCoreExt = "ChainRulesCore" @@ -1000,12 +995,6 @@ version = "0.3.27" [[deps.Logging]] uuid = "56ddb016-857b-54e1-b83d-db4d58db5568" -[[deps.LoweredCodeUtils]] -deps = ["JuliaInterpreter"] -git-tree-sha1 = "31e27f0b0bf0df3e3e951bfcc43fe8c730a219f6" -uuid = "6f1432cf-f94c-5a45-995e-cdbf5db27b0b" -version = "2.4.5" - [[deps.METIS_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] git-tree-sha1 = "1fd0a97409e418b78c53fac671cf4622efdf0f21" @@ -1014,15 +1003,20 @@ version = "5.1.2+0" [[deps.MKL_jll]] deps = ["Artifacts", "IntelOpenMP_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "oneTBB_jll"] -git-tree-sha1 = "80b2833b56d466b3858d565adcd16a4a05f2089b" +git-tree-sha1 = "f046ccd0c6db2832a9f639e2c669c6fe867e5f4f" uuid = "856f044c-d86e-5d09-b602-aeab76dc8ba7" -version = "2024.1.0+0" +version = "2024.2.0+0" + +[[deps.MLStyle]] +git-tree-sha1 = "bc38dff0548128765760c79eb7388a4b37fae2c8" +uuid = "d8e11817-5142-5d16-987a-aa16d5891078" +version = "0.4.17" [[deps.MUMPS_seq_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "METIS_jll", "libblastrampoline_jll"] -git-tree-sha1 = "840b83c65b27e308095c139a457373850b2f5977" +git-tree-sha1 = "85047ac569761e3387717480a38a61d2a67df45c" uuid = "d7ed1dd3-d0ae-5e8e-bfb4-87a502085b8d" -version = "500.600.201+0" +version = "500.700.300+0" [[deps.MacroTools]] deps = ["Markdown", "Random"] @@ -1031,16 +1025,16 @@ uuid = "1914dd2f-81c6-5fcd-8719-6d5c9610ff09" version = "0.5.13" [[deps.Makie]] -deps = ["Animations", "Base64", "CRC32c", "ColorBrewer", "ColorSchemes", "ColorTypes", "Colors", "Contour", "DelaunayTriangulation", "Distributions", "DocStringExtensions", "Downloads", "FFMPEG_jll", "FileIO", "FixedPointNumbers", "Formatting", "FreeType", "FreeTypeAbstraction", "GeometryBasics", "GridLayoutBase", "ImageIO", "InteractiveUtils", "IntervalSets", "Isoband", "KernelDensity", "LaTeXStrings", "LinearAlgebra", "MacroTools", "MakieCore", "Markdown", "MathTeXEngine", "Observables", "OffsetArrays", "Packing", "PlotUtils", "PolygonOps", "PrecompileTools", "Printf", "REPL", "Random", "RelocatableFolders", "Setfield", "ShaderAbstractions", "Showoff", "SignedDistanceFields", "SparseArrays", "StableHashTraits", "Statistics", "StatsBase", "StatsFuns", "StructArrays", "TriplotBase", "UnicodeFun"] -git-tree-sha1 = "35fa3c150cd96fd77417a23965b7037b90d6ffc9" +deps = ["Animations", "Base64", "CRC32c", "ColorBrewer", "ColorSchemes", "ColorTypes", "Colors", "Contour", "DelaunayTriangulation", "Distributions", "DocStringExtensions", "Downloads", "FFMPEG_jll", "FileIO", "FilePaths", "FixedPointNumbers", "Format", "FreeType", "FreeTypeAbstraction", "GeometryBasics", "GridLayoutBase", "ImageIO", "InteractiveUtils", "IntervalSets", "Isoband", "KernelDensity", "LaTeXStrings", "LinearAlgebra", "MacroTools", "MakieCore", "Markdown", "MathTeXEngine", "Observables", "OffsetArrays", "Packing", "PlotUtils", "PolygonOps", "PrecompileTools", "Printf", "REPL", "Random", "RelocatableFolders", "Scratch", "ShaderAbstractions", "Showoff", "SignedDistanceFields", "SparseArrays", "Statistics", "StatsBase", "StatsFuns", "StructArrays", "TriplotBase", "UnicodeFun"] +git-tree-sha1 = "4d49c9ee830eec99d3e8de2425ff433ece7cc1bc" uuid = "ee78f7c6-11fb-53f2-987a-cfe4a2b5a57a" -version = "0.19.12" +version = "0.20.10" [[deps.MakieCore]] deps = ["Observables", "REPL"] -git-tree-sha1 = "9b11acd07f21c4d035bd4156e789532e8ee2cc70" +git-tree-sha1 = "248b7a4be0f92b497f7a331aed02c1e9a878f46b" uuid = "20f20a25-4f0e-4fdf-b5d1-57303727442b" -version = "0.6.9" +version = "0.7.3" [[deps.MappedArrays]] git-tree-sha1 = "2dab0221fe2b0f2cb6754eaa743cc266339f527e" @@ -1053,9 +1047,9 @@ uuid = "d6f4376e-aef5-505a-96c1-9c027394607a" [[deps.MathOptInterface]] deps = ["BenchmarkTools", "CodecBzip2", "CodecZlib", "DataStructures", "ForwardDiff", "JSON", "LinearAlgebra", "MutableArithmetics", "NaNMath", "OrderedCollections", "PrecompileTools", "Printf", "SparseArrays", "SpecialFunctions", "Test", "Unicode"] -git-tree-sha1 = "9cc5acd6b76174da7503d1de3a6f8cf639b6e5cb" +git-tree-sha1 = "c0fe113e9c72aa0c9a185fd3c5ca1daa51de1486" uuid = "b8f27783-ece8-5eb3-8dc8-9495eed66fee" -version = "1.29.0" +version = "1.31.1" [[deps.MathTeXEngine]] deps = ["AbstractTrees", "Automa", "DataStructures", "FreeTypeAbstraction", "GeometryBasics", "LaTeXStrings", "REPL", "RelocatableFolders", "UnicodeFun"] @@ -1083,11 +1077,6 @@ version = "1.2.0" [[deps.Mmap]] uuid = "a63ad114-7e13-5084-954f-fe012c677804" -[[deps.Mods]] -git-tree-sha1 = "924f962b524a71eef7a21dae1e6853817f9b658f" -uuid = "7475f97c-0381-53b1-977b-4c60186c8d62" -version = "2.2.4" - [[deps.MosaicViews]] deps = ["MappedArrays", "OffsetArrays", "PaddedViews", "StackViews"] git-tree-sha1 = "7b86a5d4d70a9f5cdf2dacb3cbe6d251d1a61dbe" @@ -1098,28 +1087,17 @@ version = "0.3.4" uuid = "14a3606d-f60d-562e-9121-12d972cd8159" version = "2023.1.10" -[[deps.Multisets]] -git-tree-sha1 = "8d852646862c96e226367ad10c8af56099b4047e" -uuid = "3b2b4ff1-bcff-5658-a3ee-dbcf1ce5ac09" -version = "0.4.4" - [[deps.MultivariatePolynomials]] deps = ["ChainRulesCore", "DataStructures", "LinearAlgebra", "MutableArithmetics"] -git-tree-sha1 = "769c9175942d91ed9b83fa929eee4fe6a1d128ad" +git-tree-sha1 = "5c1d1d9361e1417e5a065e1f84dc3686cbdaea21" uuid = "102ac46a-7ee4-5c85-9060-abc95bfdeaa3" -version = "0.5.4" +version = "0.5.6" [[deps.MutableArithmetics]] deps = ["LinearAlgebra", "SparseArrays", "Test"] -git-tree-sha1 = "a3589efe0005fc4718775d8641b2de9060d23f73" +git-tree-sha1 = "d0a6b1096b584a2b88efb70a92f8cb8c881eb38a" uuid = "d8a4904e-b15c-11e9-3269-09a3773c0cb0" -version = "1.4.4" - -[[deps.NLSolversBase]] -deps = ["DiffResults", "Distributed", "FiniteDiff", "ForwardDiff"] -git-tree-sha1 = "a0b464d183da839699f4c79e7606d9d186ec172c" -uuid = "d41bc354-129a-5804-8e4c-c37616107c6c" -version = "7.8.3" +version = "1.4.6" [[deps.NaNMath]] deps = ["OpenLibm_jll"] @@ -1128,10 +1106,10 @@ uuid = "77ba4419-2d1f-58cd-9bb1-8ffee604a2e3" version = "1.0.2" [[deps.NamedTrajectories]] -deps = ["CairoMakie", "JLD2", "LaTeXStrings", "Latexify", "OrderedCollections", "Reexport", "Revise", "Unidecode"] -git-tree-sha1 = "72404ced973daa4c3e6598317b88cea37a1a6847" +deps = ["CairoMakie", "JLD2", "LaTeXStrings", "Latexify", "OrderedCollections", "Random", "Reexport", "Unidecode"] +git-tree-sha1 = "94fa6864fcf891e7214a1dd73c773d325556de28" uuid = "538bc3a1-5ab9-4fc3-b776-35ca1e893e08" -version = "0.1.4" +version = "0.2.0" [[deps.Netpbm]] deps = ["FileIO", "ImageCore", "ImageMetadata"] @@ -1149,9 +1127,9 @@ uuid = "510215fc-4207-5dde-b226-833fc4488ee2" version = "0.5.5" [[deps.OffsetArrays]] -git-tree-sha1 = "e64b4f5ea6b7389f6f046d13d4896a8f9c1ba71e" +git-tree-sha1 = "1a27764e945a152f7ca7efa04de513d473e9542e" uuid = "6fe1bfb0-de20-5000-8ca7-80f57d26f881" -version = "1.14.0" +version = "1.14.1" weakdeps = ["Adapt"] [deps.OffsetArrays.extensions] @@ -1193,9 +1171,9 @@ version = "0.8.1+2" [[deps.OpenSSL_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "3da7367955dcc5c54c1ba4d402ccdc09a1a3e046" +git-tree-sha1 = "a028ee3cb5641cccc4c24e90c36b0a4f7707bdf5" uuid = "458c3c95-2e84-50aa-8efc-19380b2a3a95" -version = "3.0.13+1" +version = "3.0.14+0" [[deps.OpenSpecFun_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Pkg"] @@ -1203,16 +1181,6 @@ git-tree-sha1 = "13652491f6856acfd2db29360e1bbcd4565d04f1" uuid = "efe28fd5-8261-553b-a9e1-b2916fc3738e" version = "0.5.5+0" -[[deps.Optim]] -deps = ["Compat", "FillArrays", "ForwardDiff", "LineSearches", "LinearAlgebra", "NLSolversBase", "NaNMath", "Parameters", "PositiveFactorizations", "Printf", "SparseArrays", "StatsBase"] -git-tree-sha1 = "d9b79c4eed437421ac4285148fcadf42e0700e89" -uuid = "429524aa-4258-5aef-a3af-852621145aeb" -version = "1.9.4" -weakdeps = ["MathOptInterface"] - - [deps.Optim.extensions] - OptimMOIExt = "MathOptInterface" - [[deps.Opus_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] git-tree-sha1 = "51a08fb14ec28da2ec7a927c4337e4332c2a4720" @@ -1259,35 +1227,17 @@ git-tree-sha1 = "cb5a2ab6763464ae0f19c86c56c63d4a2b0f5bda" uuid = "36c8627f-9965-5494-a995-c6b170f724f3" version = "1.52.2+0" -[[deps.Parameters]] -deps = ["OrderedCollections", "UnPack"] -git-tree-sha1 = "34c0e9ad262e5f7fc75b10a9952ca7692cfc5fbe" -uuid = "d96e819e-fc66-5662-9728-84c9c7592b0a" -version = "0.12.3" - [[deps.Parsers]] deps = ["Dates", "PrecompileTools", "UUIDs"] git-tree-sha1 = "8489905bcdbcfac64d1daa51ca07c0d8f0283821" uuid = "69de0a69-1ddd-5017-9359-2bf0b02dc9f0" version = "2.8.1" -[[deps.Permutations]] -deps = ["Combinatorics", "LinearAlgebra", "Random"] -git-tree-sha1 = "4ca430561cf37c75964c8478eddae2d79e96ca9b" -uuid = "2ae35dd2-176d-5d53-8349-f30d82d94d4f" -version = "0.4.21" - -[[deps.PikaParser]] -deps = ["DocStringExtensions"] -git-tree-sha1 = "d6ff87de27ff3082131f31a714d25ab6d0a88abf" -uuid = "3bbf5609-3e7b-44cd-8549-7c69f321e792" -version = "0.6.1" - [[deps.Pixman_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "LLVMOpenMP_jll", "Libdl"] -git-tree-sha1 = "64779bc4c9784fee475689a1752ef4d5747c5e87" +git-tree-sha1 = "35621f10a7531bc8fa58f74610b1bfb70a3cfc6b" uuid = "30392449-352a-5448-841d-b1acce4e97dc" -version = "0.42.2+0" +version = "0.43.4+0" [[deps.Pkg]] deps = ["Artifacts", "Dates", "Downloads", "FileWatching", "LibGit2", "Libdl", "Logging", "Markdown", "Printf", "REPL", "Random", "SHA", "Serialization", "TOML", "Tar", "UUIDs", "p7zip_jll"] @@ -1311,30 +1261,11 @@ git-tree-sha1 = "77b3d3605fc1cd0b42d95eba87dfcd2bf67d5ff6" uuid = "647866c9-e3ac-4575-94e7-e3d426903924" version = "0.1.2" -[[deps.Polynomials]] -deps = ["LinearAlgebra", "RecipesBase", "Setfield", "SparseArrays"] -git-tree-sha1 = "89620a0b5458dca4bf9ea96174fa6422b3adf6f9" -uuid = "f27b6e38-b328-58d1-80ce-0feddd5e7a45" -version = "4.0.8" -weakdeps = ["ChainRulesCore", "FFTW", "MakieCore", "MutableArithmetics"] - - [deps.Polynomials.extensions] - PolynomialsChainRulesCoreExt = "ChainRulesCore" - PolynomialsFFTWExt = "FFTW" - PolynomialsMakieCoreExt = "MakieCore" - PolynomialsMutableArithmeticsExt = "MutableArithmetics" - -[[deps.PositiveFactorizations]] -deps = ["LinearAlgebra"] -git-tree-sha1 = "17275485f373e6673f7e7f97051f703ed5b15b20" -uuid = "85a6dd25-e78a-55b7-8502-1745935b8125" -version = "0.2.4" - [[deps.PreallocationTools]] deps = ["Adapt", "ArrayInterface", "ForwardDiff"] -git-tree-sha1 = "a660e9daab5db07adf3dedfe09b435cc530d855e" +git-tree-sha1 = "6c62ce45f268f3f958821a1e5192cf91c75ae89c" uuid = "d236fae5-4411-538c-8e31-a6e3d9e00b46" -version = "0.4.21" +version = "0.4.24" [deps.PreallocationTools.extensions] PreallocationToolsReverseDiffExt = "ReverseDiff" @@ -1354,12 +1285,6 @@ git-tree-sha1 = "9306f6085165d270f7e3db02af26a400d580f5c6" uuid = "21216c6a-2e73-6563-6e65-726566657250" version = "1.4.3" -[[deps.Primes]] -deps = ["IntegerMathUtils"] -git-tree-sha1 = "cb420f77dc474d23ee47ca8d14c90810cafe69e7" -uuid = "27ebfcd6-29c5-5fa9-bf4b-fb8fc14df3ae" -version = "0.5.6" - [[deps.Printf]] deps = ["Unicode"] uuid = "de0858da-6303-5e67-8744-51eddeeeb8d7" @@ -1370,9 +1295,14 @@ uuid = "9abbd945-dff8-562f-b5e8-e1ebf5ef1b79" [[deps.ProgressMeter]] deps = ["Distributed", "Printf"] -git-tree-sha1 = "763a8ceb07833dd51bb9e3bbca372de32c0605ad" +git-tree-sha1 = "8f6bc219586aef8baf0ff9a5fe16ee9c70cb65e4" uuid = "92933f4c-e287-5a05-a399-4b506db050ca" -version = "1.10.0" +version = "1.10.2" + +[[deps.PtrArrays]] +git-tree-sha1 = "f011fbb92c4d401059b2212c05c0601b70f8b759" +uuid = "43287f4e-b6f4-7ad1-bb20-aadabca52c3d" +version = "1.2.0" [[deps.QOI]] deps = ["ColorTypes", "FileIO", "FixedPointNumbers"] @@ -1382,15 +1312,13 @@ version = "1.0.0" [[deps.QuadGK]] deps = ["DataStructures", "LinearAlgebra"] -git-tree-sha1 = "9b23c31e76e333e6fb4c1595ae6afa74966a729e" +git-tree-sha1 = "e237232771fdafbae3db5c31275303e056afaa9f" uuid = "1fd47b50-473d-5c70-9696-f719f8f3bcdc" -version = "2.9.4" +version = "2.10.1" [[deps.QuantumCollocation]] -deps = ["BenchmarkTools", "CairoMakie", "Distributions", "Einsum", "ForwardDiff", "IJulia", "Ipopt", "JLD2", "Libdl", "LinearAlgebra", "MathOptInterface", "NamedTrajectories", "Random", "Reexport", "SparseArrays", "Symbolics", "TestItemRunner", "TestItems", "TrajectoryIndexingUtils"] -git-tree-sha1 = "48bc15ce2f5255db0592454531149085b18956b1" -repo-rev = "main" -repo-url = "https://github.com/aarontrowbridge/QuantumCollocation.jl.git" +deps = ["BenchmarkTools", "CairoMakie", "Distributions", "Einsum", "ExponentialAction", "ForwardDiff", "IJulia", "Ipopt", "JLD2", "Libdl", "LinearAlgebra", "MathOptInterface", "NamedTrajectories", "ProgressMeter", "Random", "Reexport", "SparseArrays", "Symbolics", "TestItemRunner", "TestItems", "TrajectoryIndexingUtils"] +git-tree-sha1 = "f1e087c45f987f4de8668b3552ff1b6275bc6a33" uuid = "0dc23a59-5ffb-49af-b6bd-932a8ae77adf" version = "0.2.0" @@ -1424,10 +1352,10 @@ uuid = "3cdcf5f2-1ef4-517c-9805-6587b60abb01" version = "1.3.4" [[deps.RecursiveArrayTools]] -deps = ["Adapt", "ArrayInterface", "DocStringExtensions", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "SparseArrays", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables"] -git-tree-sha1 = "f599a896fb28043dd63a4d372231dfcbdd117394" +deps = ["Adapt", "ArrayInterface", "DocStringExtensions", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables"] +git-tree-sha1 = "b034171b93aebc81b3e1890a036d13a9c4a9e3e0" uuid = "731186ca-8d62-57ce-b412-fbd966d074cd" -version = "3.16.0" +version = "3.27.0" [deps.RecursiveArrayTools.extensions] RecursiveArrayToolsFastBroadcastExt = "FastBroadcast" @@ -1435,6 +1363,7 @@ version = "3.16.0" RecursiveArrayToolsMeasurementsExt = "Measurements" RecursiveArrayToolsMonteCarloMeasurementsExt = "MonteCarloMeasurements" RecursiveArrayToolsReverseDiffExt = ["ReverseDiff", "Zygote"] + RecursiveArrayToolsSparseArraysExt = ["SparseArrays"] RecursiveArrayToolsTrackerExt = "Tracker" RecursiveArrayToolsZygoteExt = "Zygote" @@ -1444,6 +1373,7 @@ version = "3.16.0" Measurements = "eff96d63-e80a-5855-80a2-b1b0885c5ab7" MonteCarloMeasurements = "0987c9cc-fe09-11e8-30f0-b96dd679fdca" ReverseDiff = "37e2e3b7-166d-5795-8a7a-e32c996b4267" + SparseArrays = "2f01184e-e22b-5df5-ae63-d93ebab69eaf" Tracker = "9f7883ad-71c0-57eb-9f7f-b5c9e6d3789c" Zygote = "e88e6eb3-aa80-5325-afca-941959d7151f" @@ -1464,18 +1394,6 @@ git-tree-sha1 = "838a3a4188e2ded87a4f9f184b4b0d78a1e91cb7" uuid = "ae029012-a4dd-5104-9daa-d747884805df" version = "1.3.0" -[[deps.Revise]] -deps = ["CodeTracking", "Distributed", "FileWatching", "JuliaInterpreter", "LibGit2", "LoweredCodeUtils", "OrderedCollections", "Pkg", "REPL", "Requires", "UUIDs", "Unicode"] -git-tree-sha1 = "12aa2d7593df490c407a3bbd8b86b8b515017f3e" -uuid = "295af30f-e4ad-537b-8983-00126c2a3abe" -version = "3.5.14" - -[[deps.RingLists]] -deps = ["Random"] -git-tree-sha1 = "f39da63aa6d2d88e0c1bd20ed6a3ff9ea7171ada" -uuid = "286e9d63-9694-5540-9e3c-4e6708fa07b2" -version = "0.2.8" - [[deps.Rmath]] deps = ["Random", "Rmath_jll"] git-tree-sha1 = "f65dcb5fa46aee0cf9ed6274ccbd597adc49aa7b" @@ -1483,10 +1401,10 @@ uuid = "79098fc4-a85e-5d69-aa6a-4863f24498fa" version = "0.7.1" [[deps.Rmath_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "6ed52fdd3382cf21947b15e8870ac0ddbff736da" +deps = ["Artifacts", "JLLWrappers", "Libdl"] +git-tree-sha1 = "e60724fd3beea548353984dc61c943ecddb0e29a" uuid = "f50d1b31-88e8-58de-be2c-1cc44531875f" -version = "0.4.0+0" +version = "0.4.3+0" [[deps.RoundingEmulator]] git-tree-sha1 = "40b9edad2e5287e05bd413a38f61a8ff55b9557b" @@ -1503,20 +1421,27 @@ version = "0.5.13" uuid = "ea8e919c-243c-51af-8825-aaa63cd721ce" version = "0.7.0" +[[deps.SIMD]] +deps = ["PrecompileTools"] +git-tree-sha1 = "2803cab51702db743f3fda07dd1745aadfbf43bd" +uuid = "fdea26ae-647d-5447-a871-4b548cad5224" +version = "3.5.0" + [[deps.SPRAL_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "Hwloc_jll", "JLLWrappers", "Libdl", "METIS_jll", "libblastrampoline_jll"] -git-tree-sha1 = "34b9dacd687cace8aa4d550e3e9bb8615f1a61e9" +git-tree-sha1 = "11f3da4b25efacd1cec8e263421f2a9003a5e8e0" uuid = "319450e9-13b8-58e8-aa9f-8fd1420848ab" -version = "2024.1.18+0" +version = "2024.5.8+0" [[deps.SciMLBase]] -deps = ["ADTypes", "ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FillArrays", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PrecompileTools", "Preferences", "Printf", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "TruncatedStacktraces"] -git-tree-sha1 = "75bae786dc8b07ec3c2159d578886691823bcb42" +deps = ["ADTypes", "Accessors", "ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "Expronicon", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PrecompileTools", "Preferences", "Printf", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "SciMLStructures", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables"] +git-tree-sha1 = "5123ca064567e81c31fb3acdf15d2c9459bb7cc3" uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462" -version = "2.23.1" +version = "2.50.0" [deps.SciMLBase.extensions] SciMLBaseChainRulesCoreExt = "ChainRulesCore" + SciMLBaseMakieExt = "Makie" SciMLBasePartialFunctionsExt = "PartialFunctions" SciMLBasePyCallExt = "PyCall" SciMLBasePythonCallExt = "PythonCall" @@ -1526,6 +1451,7 @@ version = "2.23.1" [deps.SciMLBase.weakdeps] ChainRules = "082447d4-558c-5d27-93f4-14fc19e9eca2" ChainRulesCore = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" + Makie = "ee78f7c6-11fb-53f2-987a-cfe4a2b5a57a" PartialFunctions = "570af359-4316-4cb7-8c74-252c00c2016b" PyCall = "438e738f-606a-5dbb-bf0a-cddfbfd45ab0" PythonCall = "6099a3de-0909-46bc-b1f4-468b9a2dfc0d" @@ -1533,10 +1459,17 @@ version = "2.23.1" Zygote = "e88e6eb3-aa80-5325-afca-941959d7151f" [[deps.SciMLOperators]] -deps = ["ArrayInterface", "DocStringExtensions", "LinearAlgebra", "MacroTools", "Setfield", "SparseArrays", "StaticArraysCore"] -git-tree-sha1 = "10499f619ef6e890f3f4a38914481cc868689cd5" +deps = ["ArrayInterface", "DocStringExtensions", "LinearAlgebra", "MacroTools", "Setfield", "StaticArraysCore"] +git-tree-sha1 = "23b02c588ac9a17ecb276cc62ab37f3e4fe37b32" uuid = "c0aeaf25-5076-4817-a8d5-81caf7dfa961" -version = "0.3.8" +version = "0.3.9" +weakdeps = ["SparseArrays"] + +[[deps.SciMLStructures]] +deps = ["ArrayInterface"] +git-tree-sha1 = "20ad3e7c137156c50c93c888d0f2bc5b7883c729" +uuid = "53ae85a6-f571-4167-b2af-e1d143709226" +version = "1.4.2" [[deps.Scratch]] deps = ["Dates"] @@ -1575,30 +1508,6 @@ git-tree-sha1 = "d263a08ec505853a5ff1c1ebde2070419e3f28e9" uuid = "73760f76-fbc4-59ce-8f25-708e95d2df96" version = "0.4.0" -[[deps.SimpleGraphs]] -deps = ["AbstractLattices", "Combinatorics", "DataStructures", "IterTools", "LightXML", "LinearAlgebra", "LinearAlgebraX", "Optim", "Primes", "Random", "RingLists", "SimplePartitions", "SimplePolynomials", "SimpleRandom", "SparseArrays", "Statistics"] -git-tree-sha1 = "f65caa24a622f985cc341de81d3f9744435d0d0f" -uuid = "55797a34-41de-5266-9ec1-32ac4eb504d3" -version = "0.8.6" - -[[deps.SimplePartitions]] -deps = ["AbstractLattices", "DataStructures", "Permutations"] -git-tree-sha1 = "e182b9e5afb194142d4668536345a365ea19363a" -uuid = "ec83eff0-a5b5-5643-ae32-5cbf6eedec9d" -version = "0.3.2" - -[[deps.SimplePolynomials]] -deps = ["Mods", "Multisets", "Polynomials", "Primes"] -git-tree-sha1 = "7063828369cafa93f3187b3d0159f05582011405" -uuid = "cc47b68c-3164-5771-a705-2bc0097375a0" -version = "0.2.17" - -[[deps.SimpleRandom]] -deps = ["Distributions", "LinearAlgebra", "Random"] -git-tree-sha1 = "3a6fb395e37afab81aeea85bae48a4db5cd7244a" -uuid = "a6525b86-64cd-54fa-8f65-62fc48bdc0e8" -version = "0.3.1" - [[deps.SimpleTraits]] deps = ["InteractiveUtils", "MacroTools"] git-tree-sha1 = "5d7e3f4e11935503d3ecaf7186eac40602e7d231" @@ -1633,20 +1542,14 @@ version = "1.10.0" [[deps.SpecialFunctions]] deps = ["IrrationalConstants", "LogExpFunctions", "OpenLibm_jll", "OpenSpecFun_jll"] -git-tree-sha1 = "e2cfc4012a19088254b3950b85c3c1d8882d864d" +git-tree-sha1 = "2f5d4697f21388cbe1ff299430dd169ef97d7e14" uuid = "276daf66-3868-5448-9aa4-cd146d93841b" -version = "2.3.1" +version = "2.4.0" weakdeps = ["ChainRulesCore"] [deps.SpecialFunctions.extensions] SpecialFunctionsChainRulesCoreExt = "ChainRulesCore" -[[deps.StableHashTraits]] -deps = ["Compat", "PikaParser", "SHA", "Tables", "TupleTools"] -git-tree-sha1 = "10dc702932fe05a0e09b8e5955f00794ea1e8b12" -uuid = "c5dd0088-6c3f-4803-b00e-f31a60c170fa" -version = "1.1.8" - [[deps.StackViews]] deps = ["OffsetArrays"] git-tree-sha1 = "46e589465204cd0c08b4bd97385e4fa79a0c770c" @@ -1655,9 +1558,9 @@ version = "0.1.1" [[deps.StaticArrays]] deps = ["LinearAlgebra", "PrecompileTools", "Random", "StaticArraysCore"] -git-tree-sha1 = "bf074c045d3d5ffd956fa0a461da38a44685d6b2" +git-tree-sha1 = "eeafab08ae20c62c44c8399ccb9354a04b80db50" uuid = "90137ffa-7385-5640-81b9-e52037218182" -version = "1.9.3" +version = "1.9.7" weakdeps = ["ChainRulesCore", "Statistics"] [deps.StaticArrays.extensions] @@ -1665,9 +1568,9 @@ weakdeps = ["ChainRulesCore", "Statistics"] StaticArraysStatisticsExt = "Statistics" [[deps.StaticArraysCore]] -git-tree-sha1 = "36b3d696ce6366023a0ea192b4cd442268995a0d" +git-tree-sha1 = "192954ef1208c7019899fbf8049e717f92959682" uuid = "1e83bf80-4336-4d27-bf5d-d5a4f845583c" -version = "1.4.2" +version = "1.4.3" [[deps.Statistics]] deps = ["LinearAlgebra", "SparseArrays"] @@ -1721,35 +1624,37 @@ version = "7.2.1+1" [[deps.SymbolicIndexingInterface]] deps = ["Accessors", "ArrayInterface", "RuntimeGeneratedFunctions", "StaticArraysCore"] -git-tree-sha1 = "b479c7a16803f08779ac5b7f9844a42621baeeda" +git-tree-sha1 = "c9fce29fb41a10677e24f74421ebe31220b81ad0" uuid = "2efcf032-c050-4f8e-a9bb-153293bab1f5" -version = "0.3.21" +version = "0.3.28" [[deps.SymbolicLimits]] deps = ["SymbolicUtils"] -git-tree-sha1 = "89aa6b25a75418c8fffc42073b2e7dce69847394" +git-tree-sha1 = "fabf4650afe966a2ba646cabd924c3fd43577fc3" uuid = "19f23fe9-fdab-4a78-91af-e7b7767979c3" -version = "0.2.0" +version = "0.2.2" [[deps.SymbolicUtils]] -deps = ["AbstractTrees", "Bijections", "ChainRulesCore", "Combinatorics", "ConstructionBase", "DataStructures", "DocStringExtensions", "DynamicPolynomials", "IfElse", "LabelledArrays", "LinearAlgebra", "MultivariatePolynomials", "NaNMath", "Setfield", "SparseArrays", "SpecialFunctions", "StaticArrays", "SymbolicIndexingInterface", "TimerOutputs", "Unityper"] -git-tree-sha1 = "669e43e90df46fcee4aa859b587da7a7948272ac" +deps = ["AbstractTrees", "Bijections", "ChainRulesCore", "Combinatorics", "ConstructionBase", "DataStructures", "DocStringExtensions", "DynamicPolynomials", "IfElse", "LabelledArrays", "LinearAlgebra", "MultivariatePolynomials", "NaNMath", "Setfield", "SparseArrays", "SpecialFunctions", "StaticArrays", "SymbolicIndexingInterface", "TermInterface", "TimerOutputs", "Unityper"] +git-tree-sha1 = "d00729521f49d96afd3fcddb437141eb71222886" uuid = "d1185830-fcd6-423d-90d6-eec64667417b" -version = "1.5.1" +version = "3.2.0" [[deps.Symbolics]] -deps = ["ArrayInterface", "Bijections", "ConstructionBase", "DataStructures", "DiffRules", "Distributions", "DocStringExtensions", "DomainSets", "DynamicPolynomials", "ForwardDiff", "IfElse", "LaTeXStrings", "LambertW", "Latexify", "Libdl", "LinearAlgebra", "LogExpFunctions", "MacroTools", "Markdown", "NaNMath", "PrecompileTools", "RecipesBase", "Reexport", "Requires", "RuntimeGeneratedFunctions", "SciMLBase", "Setfield", "SparseArrays", "SpecialFunctions", "StaticArrays", "SymbolicIndexingInterface", "SymbolicLimits", "SymbolicUtils"] -git-tree-sha1 = "4104548fff14d7370b278ee767651d6ec61eb195" +deps = ["ADTypes", "ArrayInterface", "Bijections", "CommonWorldInvalidations", "ConstructionBase", "DataStructures", "DiffRules", "Distributions", "DocStringExtensions", "DomainSets", "DynamicPolynomials", "IfElse", "LaTeXStrings", "LambertW", "Latexify", "Libdl", "LinearAlgebra", "LogExpFunctions", "MacroTools", "Markdown", "NaNMath", "PrecompileTools", "RecipesBase", "Reexport", "RuntimeGeneratedFunctions", "SciMLBase", "Setfield", "SparseArrays", "SpecialFunctions", "StaticArraysCore", "SymbolicIndexingInterface", "SymbolicLimits", "SymbolicUtils", "TermInterface"] +git-tree-sha1 = "4224422f6a5452b1accaec15a65a5ce3c2ca4600" uuid = "0c5d862f-8b57-4792-8d23-62f2024744c7" -version = "5.28.0" +version = "6.2.0" [deps.Symbolics.extensions] + SymbolicsForwardDiffExt = "ForwardDiff" SymbolicsGroebnerExt = "Groebner" SymbolicsLuxCoreExt = "LuxCore" - SymbolicsPreallocationToolsExt = "PreallocationTools" + SymbolicsPreallocationToolsExt = ["PreallocationTools", "ForwardDiff"] SymbolicsSymPyExt = "SymPy" [deps.Symbolics.weakdeps] + ForwardDiff = "f6369f11-7733-5829-9624-2563aa707210" Groebner = "0b43b601-686d-58a3-8a1c-6623616c7cd4" LuxCore = "bb33d45b-7691-41d6-9220-0943567d0623" PreallocationTools = "d236fae5-4411-538c-8e31-a6e3d9e00b46" @@ -1767,10 +1672,10 @@ uuid = "3783bdb8-4a98-5b6b-af9a-565f29a5fe9c" version = "1.0.1" [[deps.Tables]] -deps = ["DataAPI", "DataValueInterfaces", "IteratorInterfaceExtensions", "LinearAlgebra", "OrderedCollections", "TableTraits"] -git-tree-sha1 = "cb76cf677714c095e535e3501ac7954732aeea2d" +deps = ["DataAPI", "DataValueInterfaces", "IteratorInterfaceExtensions", "OrderedCollections", "TableTraits"] +git-tree-sha1 = "598cd7c1f68d1e205689b1c2fe65a9f85846f297" uuid = "bd369af6-aec1-5ad0-b16a-f7cc5008161c" -version = "1.11.1" +version = "1.12.0" [[deps.Tar]] deps = ["ArgTools", "SHA"] @@ -1783,6 +1688,11 @@ git-tree-sha1 = "1feb45f88d133a655e001435632f019a9a1bcdb6" uuid = "62fd8b95-f654-4bbd-a8a5-9c27f68ccd50" version = "0.1.1" +[[deps.TermInterface]] +git-tree-sha1 = "d673e0aca9e46a2f63720201f55cc7b3e7169b16" +uuid = "8ea1fca8-c5ef-4a55-8b96-4e9afe9c9a3c" +version = "2.0.0" + [[deps.Test]] deps = ["InteractiveUtils", "Logging", "Random", "Serialization"] uuid = "8dfed614-e22c-5e08-85e1-65c5234f0b40" @@ -1799,16 +1709,16 @@ uuid = "1c621080-faea-4a02-84b6-bbd5e436b8fe" version = "0.1.1" [[deps.TiffImages]] -deps = ["ColorTypes", "DataStructures", "DocStringExtensions", "FileIO", "FixedPointNumbers", "IndirectArrays", "Inflate", "Mmap", "OffsetArrays", "PkgVersion", "ProgressMeter", "UUIDs"] -git-tree-sha1 = "34cc045dd0aaa59b8bbe86c644679bc57f1d5bd0" +deps = ["ColorTypes", "DataStructures", "DocStringExtensions", "FileIO", "FixedPointNumbers", "IndirectArrays", "Inflate", "Mmap", "OffsetArrays", "PkgVersion", "ProgressMeter", "SIMD", "UUIDs"] +git-tree-sha1 = "bc7fd5c91041f44636b2c134041f7e5263ce58ae" uuid = "731e570b-9d59-4bfa-96dc-6df516fadf69" -version = "0.6.8" +version = "0.10.0" [[deps.TimerOutputs]] deps = ["ExprTools", "Printf"] -git-tree-sha1 = "f548a9e9c490030e545f72074a41edfd0e5bcdd7" +git-tree-sha1 = "5a13ae8a41237cff5ecf34f73eb1b8f42fff6531" uuid = "a759f4b9-e2f1-59dc-863e-4aeb61b1ea8f" -version = "0.5.23" +version = "0.5.24" [[deps.TrajectoryIndexingUtils]] git-tree-sha1 = "108da5f045005c9b57e6713ea84aca49d77fccaa" @@ -1816,39 +1726,19 @@ uuid = "6dad8b7f-dd9a-4c28-9b70-85b9a079bfc8" version = "0.1.0" [[deps.TranscodingStreams]] -git-tree-sha1 = "5d54d076465da49d6746c647022f3b3674e64156" +git-tree-sha1 = "e84b3a11b9bece70d14cce63406bbc79ed3464d2" uuid = "3bb67fe8-82b1-5028-8e26-92a6c54297fa" -version = "0.10.8" -weakdeps = ["Random", "Test"] - - [deps.TranscodingStreams.extensions] - TestExt = ["Test", "Random"] +version = "0.11.2" [[deps.TriplotBase]] git-tree-sha1 = "4d4ed7f294cda19382ff7de4c137d24d16adc89b" uuid = "981d1d27-644d-49a2-9326-4793e63143c3" version = "0.1.0" -[[deps.TruncatedStacktraces]] -deps = ["InteractiveUtils", "MacroTools", "Preferences"] -git-tree-sha1 = "ea3e54c2bdde39062abf5a9758a23735558705e1" -uuid = "781d530d-4396-4725-bb49-402e4bee1e77" -version = "1.4.0" - -[[deps.TupleTools]] -git-tree-sha1 = "41d61b1c545b06279871ef1a4b5fcb2cac2191cd" -uuid = "9d95972d-f1c8-5527-a6e0-b4b365fa01f6" -version = "1.5.0" - [[deps.UUIDs]] deps = ["Random", "SHA"] uuid = "cf7118a7-6976-5b1a-9a39-7adc72f591a4" -[[deps.UnPack]] -git-tree-sha1 = "387c1f73762231e86e0c9c5443ce3b4a0a9a0c2b" -uuid = "3a884ed6-31ef-47d7-9d2a-63182c4928ed" -version = "1.0.2" - [[deps.Unicode]] uuid = "4ec0a83e-493e-50e2-b9ac-8f72acf5a8f5" @@ -1883,15 +1773,15 @@ version = "1.0.0" [[deps.XML2_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Libiconv_jll", "Zlib_jll"] -git-tree-sha1 = "532e22cf7be8462035d092ff21fada7527e2c488" +git-tree-sha1 = "d9717ce3518dc68a99e6b96300813760d887a01d" uuid = "02c8fc9c-b97f-50b9-bbe4-9be30ff0a78a" -version = "2.12.6+0" +version = "2.13.1+0" [[deps.XSLT_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Libgcrypt_jll", "Libgpg_error_jll", "Libiconv_jll", "Pkg", "XML2_jll", "Zlib_jll"] -git-tree-sha1 = "91844873c4085240b95e795f692c4cec4d805f8a" +deps = ["Artifacts", "JLLWrappers", "Libdl", "Libgcrypt_jll", "Libgpg_error_jll", "Libiconv_jll", "XML2_jll", "Zlib_jll"] +git-tree-sha1 = "a54ee957f4c86b526460a720dbc882fa5edcbefc" uuid = "aed1982a-8fda-507f-9586-7b0439959a61" -version = "1.1.34+0" +version = "1.1.41+0" [[deps.Xorg_libX11_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Xorg_libxcb_jll", "Xorg_xtrans_jll"] @@ -1931,9 +1821,9 @@ version = "0.1.1+0" [[deps.Xorg_libxcb_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "XSLT_jll", "Xorg_libXau_jll", "Xorg_libXdmcp_jll", "Xorg_libpthread_stubs_jll"] -git-tree-sha1 = "b4bfde5d5b652e22b9c790ad00af08b6d042b97d" +git-tree-sha1 = "bcd466676fef0878338c61e655629fa7bbc69d8e" uuid = "c7cfdc94-dc32-55de-ac96-5a1b8d977c5b" -version = "1.15.0+0" +version = "1.17.0+0" [[deps.Xorg_xtrans_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] @@ -1942,10 +1832,10 @@ uuid = "c5fb5394-a638-5e4d-96e5-b29de1b5cf10" version = "1.5.0+0" [[deps.ZMQ]] -deps = ["FileWatching", "Sockets", "ZeroMQ_jll"] -git-tree-sha1 = "356d2bdcc0bce90aabee1d1c0f6d6f301eda8f77" +deps = ["FileWatching", "PrecompileTools", "Sockets", "ZeroMQ_jll"] +git-tree-sha1 = "18cfd00df3cbbebf8ea4ec7ea6bbceb3af716bd0" uuid = "c2297ded-f4af-51ae-bb23-16f91089e4e1" -version = "1.2.2" +version = "1.3.0" [[deps.ZeroMQ_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "libsodium_jll"] @@ -1965,10 +1855,10 @@ uuid = "9a68df92-36a6-505f-a73e-abb412b6bfb4" version = "0.2.3+0" [[deps.libaom_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "3a2ea60308f0996d26f1e5354e10c24e9ef905d4" +deps = ["Artifacts", "JLLWrappers", "Libdl"] +git-tree-sha1 = "1827acba325fdcdf1d2647fc8d5301dd9ba43a9d" uuid = "a4ae2306-e953-59d6-aa16-d00cac43593b" -version = "3.4.0+0" +version = "3.9.0+0" [[deps.libass_jll]] deps = ["Artifacts", "Bzip2_jll", "FreeType2_jll", "FriBidi_jll", "HarfBuzz_jll", "JLLWrappers", "Libdl", "Pkg", "Zlib_jll"] @@ -2007,9 +1897,9 @@ version = "1.0.20+0" [[deps.libvorbis_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Ogg_jll", "Pkg"] -git-tree-sha1 = "b910cb81ef3fe6e78bf6acee440bda86fd6ae00c" +git-tree-sha1 = "490376214c4721cdaca654041f635213c6165cb3" uuid = "f27f6e37-5d2b-51aa-960f-b287f2bc3b7a" -version = "1.3.7+1" +version = "1.3.7+2" [[deps.nghttp2_jll]] deps = ["Artifacts", "Libdl"] diff --git a/Project.toml b/Project.toml index 808cb48..f53711e 100644 --- a/Project.toml +++ b/Project.toml @@ -6,19 +6,16 @@ version = "0.2.0" [deps] CairoMakie = "13f3f980-e62b-5c42-98c6-ff1f3baf88f0" IJulia = "7073ff75-c697-5162-941a-fcdaad2a7d2a" -JLD2 = "033835bb-8acc-5ee8-8aae-3f567f8a3819" +LinearAlgebra = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e" NamedTrajectories = "538bc3a1-5ab9-4fc3-b776-35ca1e893e08" QuantumCollocation = "0dc23a59-5ffb-49af-b6bd-932a8ae77adf" Reexport = "189a3867-3050-52da-a836-e630ba90ab69" -Revise = "295af30f-e4ad-537b-8983-00126c2a3abe" TrajectoryIndexingUtils = "6dad8b7f-dd9a-4c28-9b70-85b9a079bfc8" [compat] -CairoMakie = "0.10" +CairoMakie = "0.10, 0.11, 0.12" IJulia = "1.24" -NamedTrajectories = "0.1" -QuantumCollocation = "0.2" +NamedTrajectories = "0.2" Reexport = "1.2" -Revise = "3.5" TrajectoryIndexingUtils = "0.1" -julia = "1.8, 1.9" +julia = "1.10" diff --git a/src/Piccolo.jl b/src/Piccolo.jl index db5b7d2..dd50286 100644 --- a/src/Piccolo.jl +++ b/src/Piccolo.jl @@ -5,5 +5,6 @@ using Reexport @reexport using TrajectoryIndexingUtils @reexport using NamedTrajectories @reexport using QuantumCollocation +@reexport using LinearAlgebra end