From 42691170bfe3a6485efb015eeb92cdeb59f0649d Mon Sep 17 00:00:00 2001 From: Aaron Trowbridge Date: Fri, 23 Feb 2024 13:38:14 -0500 Subject: [PATCH] finally fixed??? --- docs/Manifest.toml | 504 ++++++++------------------------------------- docs/Project.toml | 5 - 2 files changed, 90 insertions(+), 419 deletions(-) diff --git a/docs/Manifest.toml b/docs/Manifest.toml index 7638a35a..e32f75e1 100644 --- a/docs/Manifest.toml +++ b/docs/Manifest.toml @@ -1,31 +1,20 @@ # This file is machine-generated - editing it directly is not advised -julia_version = "1.10.0" +julia_version = "1.10.1" manifest_format = "2.0" -project_hash = "16ca5e82db63a4cabeee6962b2b2c4bd49bd5a3d" +project_hash = "a3a2f8d453b9102555a4974983c012eb32d62a14" [[deps.ADTypes]] git-tree-sha1 = "41c37aa88889c171f1300ceac1313c06e891d245" uuid = "47edcb42-4c32-4615-8424-f2b9edc5f35b" version = "0.2.6" -[[deps.ANSIColoredPrinters]] -git-tree-sha1 = "574baf8110975760d391c710b6341da1afa48d8c" -uuid = "a4c015fc-c6ff-483c-b24f-f7ea428134e9" -version = "0.0.1" - [[deps.ASL_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] git-tree-sha1 = "6252039f98492252f9e47c312c8ffda0e3b9e78d" uuid = "ae81ac8f-d209-56e5-92de-9978fef736f9" version = "0.1.3+0" -[[deps.AbstractAlgebra]] -deps = ["GroupsCore", "InteractiveUtils", "LinearAlgebra", "MacroTools", "Preferences", "Random", "RandomExtensions", "SparseArrays", "Test"] -git-tree-sha1 = "d7832de8cf7af26abac741f10372080ac6cb73df" -uuid = "c3fe647b-3220-5bb0-a1ea-a7954cac585d" -version = "0.34.7" - [[deps.AbstractDifferentiation]] deps = ["ExprTools", "LinearAlgebra", "Requires"] git-tree-sha1 = "643373e6a3d4c180a3487abd91f689e3812b1274" @@ -70,30 +59,11 @@ git-tree-sha1 = "2d9c9a55f9c93e8887ad391fbae72f8ef55e1177" uuid = "1520ce14-60c1-5f80-bbc7-55ef81b5835c" version = "0.4.5" -[[deps.Accessors]] -deps = ["CompositionsBase", "ConstructionBase", "Dates", "InverseFunctions", "LinearAlgebra", "MacroTools", "Test"] -git-tree-sha1 = "cb96992f1bec110ad211b7e410e57ddf7944c16f" -uuid = "7d9f7c33-5ae7-4f3b-8dc6-eff91059b697" -version = "0.1.35" - - [deps.Accessors.extensions] - AccessorsAxisKeysExt = "AxisKeys" - AccessorsIntervalSetsExt = "IntervalSets" - AccessorsStaticArraysExt = "StaticArrays" - AccessorsStructArraysExt = "StructArrays" - - [deps.Accessors.weakdeps] - AxisKeys = "94b1ba4f-4ee9-5380-92f1-94cde586c3c5" - IntervalSets = "8197267c-284f-5f27-9208-e0e47529a953" - Requires = "ae029012-a4dd-5104-9daa-d747884805df" - StaticArrays = "90137ffa-7385-5640-81b9-e52037218182" - StructArrays = "09ab397b-f2b6-538f-b94a-2f83cf4a842a" - [[deps.Adapt]] deps = ["LinearAlgebra", "Requires"] -git-tree-sha1 = "cde29ddf7e5726c9fb511f340244ea3481267608" +git-tree-sha1 = "0fb305e0253fd4e833d486914367a2ee2c2e78d0" uuid = "79e6a3ab-5dfb-504d-930d-738a2a938a0e" -version = "3.7.2" +version = "4.0.1" weakdeps = ["StaticArrays"] [deps.Adapt.extensions] @@ -109,11 +79,17 @@ version = "0.4.1" uuid = "0dad84c5-d112-42e6-8d28-ef12dabb789f" version = "1.1.1" -[[deps.ArnoldiMethod]] -deps = ["LinearAlgebra", "Random", "StaticArrays"] -git-tree-sha1 = "62e51b39331de8911e4a7ff6f5aaf38a5f4cc0ae" -uuid = "ec485272-7323-5ecc-a04f-4719b315124d" -version = "0.2.0" +[[deps.Arpack]] +deps = ["Arpack_jll", "Libdl", "LinearAlgebra", "Logging"] +git-tree-sha1 = "9b9b347613394885fd1c8c7729bfc60528faa436" +uuid = "7d9fca2a-8960-54d3-9f78-7d1dccf2cb97" +version = "0.5.4" + +[[deps.Arpack_jll]] +deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "OpenBLAS_jll", "Pkg"] +git-tree-sha1 = "5ba6c757e8feccf03a1554dfaf3e26b3cfc7fd5e" +uuid = "68821587-b530-5797-8361-c406ea357684" +version = "3.5.1+1" [[deps.ArrayInterface]] deps = ["Adapt", "LinearAlgebra", "Requires", "SparseArrays", "SuiteSparse"] @@ -172,11 +148,6 @@ git-tree-sha1 = "c9b163bd832e023571e86d0b90d9de92a9879088" uuid = "e2ed5e7c-b2de-5872-ae92-c73ca462fb04" version = "0.1.6" -[[deps.BitFlags]] -git-tree-sha1 = "2dc09997850d68179b69dafb58ae806167a32b1b" -uuid = "d1d4a3ce-64b1-5f1a-9ba4-7e7e69966f35" -version = "0.1.8" - [[deps.Bzip2_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] git-tree-sha1 = "9e2a6b69137e6969bab0152632dcb3bc108c8bdd" @@ -204,10 +175,10 @@ uuid = "159f3aea-2a34-519c-b102-8c37f9878175" version = "1.0.5" [[deps.CairoMakie]] -deps = ["Base64", "Cairo", "Colors", "FFTW", "FileIO", "FreeType", "GeometryBasics", "LinearAlgebra", "Makie", "PrecompileTools", "SHA"] -git-tree-sha1 = "5e21a254d82c64b1a4ed9dbdc7e87c5d9cf4a686" +deps = ["CRC32c", "Cairo", "Colors", "FFTW", "FileIO", "FreeType", "GeometryBasics", "LinearAlgebra", "Makie", "PrecompileTools"] +git-tree-sha1 = "6dc1bbdd6a133adf4aa751d12dbc2c6ae59f873d" uuid = "13f3f980-e62b-5c42-98c6-ff1f3baf88f0" -version = "0.10.12" +version = "0.11.9" [[deps.Cairo_jll]] deps = ["Artifacts", "Bzip2_jll", "CompilerSupportLibraries_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "JLLWrappers", "LZO_jll", "Libdl", "Pixman_jll", "Pkg", "Xorg_libXext_jll", "Xorg_libXrender_jll", "Zlib_jll", "libpng_jll"] @@ -312,33 +283,13 @@ weakdeps = ["Dates", "LinearAlgebra"] [[deps.CompilerSupportLibraries_jll]] deps = ["Artifacts", "Libdl"] uuid = "e66e0078-7015-5450-92f7-15fbd957f2ae" -version = "1.0.5+1" +version = "1.1.0+0" [[deps.CompositeTypes]] git-tree-sha1 = "02d2316b7ffceff992f3096ae48c7829a8aa0638" uuid = "b152e2b5-7a66-4b01-a709-34e65c35f657" version = "0.1.3" -[[deps.CompositionsBase]] -git-tree-sha1 = "802bb88cd69dfd1509f6670416bd4434015693ad" -uuid = "a33af91c-f02d-484b-be07-31d278c5ca2b" -version = "0.1.2" -weakdeps = ["InverseFunctions"] - - [deps.CompositionsBase.extensions] - CompositionsBaseInverseFunctionsExt = "InverseFunctions" - -[[deps.ConcreteStructs]] -git-tree-sha1 = "f749037478283d372048690eb3b5f92a79432b34" -uuid = "2569d6c7-a4a2-43d3-a901-331e8e4be471" -version = "0.2.3" - -[[deps.ConcurrentUtilities]] -deps = ["Serialization", "Sockets"] -git-tree-sha1 = "9c4708e3ed2b799e6124b5673a712dda0b596a9b" -uuid = "f0e56b4a-5159-44fe-b623-3e5288b988bb" -version = "2.3.1" - [[deps.Conda]] deps = ["Downloads", "JSON", "VersionParsing"] git-tree-sha1 = "51cab8e982c5b598eea9c8ceaced4b58d9dd37c9" @@ -361,17 +312,6 @@ git-tree-sha1 = "d05d9e7b7aedff4e5b51a029dced05cfb6125781" uuid = "d38c429a-6771-53c6-b99e-75d170b6e991" version = "0.6.2" -[[deps.CovarianceEstimation]] -deps = ["LinearAlgebra", "Statistics", "StatsBase", "TSVD", "WoodburyMatrices"] -git-tree-sha1 = "8755768c0bae7dfa5c10f16bb8d04bfc98df2aaa" -uuid = "587fd27a-f159-11e8-2dae-1979310e6154" -version = "0.2.12" - -[[deps.Crayons]] -git-tree-sha1 = "249fe38abf76d48563e2f4556bebd215aa317e15" -uuid = "a8cc5b0e-0ffa-5ad4-8c14-923d3ee1735f" -version = "4.1.1" - [[deps.DataAPI]] git-tree-sha1 = "abe83f3a2f1b857aac70ef8b269080af17764bbe" uuid = "9a962f9c-6df0-11e9-0e5d-c546b8b5ee8a" @@ -398,12 +338,6 @@ git-tree-sha1 = "d4e9dc4c6106b8d44e40cd4faf8261a678552c7c" uuid = "927a84f5-c5f4-47a5-9785-b46e178433df" version = "0.8.12" -[[deps.DelimitedFiles]] -deps = ["Mmap"] -git-tree-sha1 = "9e2f36d3c96a820c678f2f1f1782582fcf685bae" -uuid = "8bb1440f-4735-579b-a4ab-409b98df4dab" -version = "1.9.1" - [[deps.DiffResults]] deps = ["StaticArraysCore"] git-tree-sha1 = "782dd5f4561f5d267313f23853baaaa4c52ea621" @@ -442,17 +376,11 @@ git-tree-sha1 = "2fb1e02f2b635d0845df5d7c167fec4dd739b00d" uuid = "ffbed154-4ef7-542d-bbb7-c09d3a79fcae" version = "0.9.3" -[[deps.Documenter]] -deps = ["ANSIColoredPrinters", "AbstractTrees", "Base64", "Dates", "DocStringExtensions", "Downloads", "Git", "IOCapture", "InteractiveUtils", "JSON", "LibGit2", "Logging", "Markdown", "MarkdownAST", "Pkg", "PrecompileTools", "REPL", "RegistryInstances", "SHA", "Test", "Unicode"] -git-tree-sha1 = "2613dbec8f4748273bbe30ba71fd5cb369966bac" -uuid = "e30172f5-a6a5-5a46-863b-614d45cd2de4" -version = "1.2.1" - [[deps.DomainSets]] -deps = ["CompositeTypes", "IntervalSets", "LinearAlgebra", "Random", "StaticArrays", "Statistics"] -git-tree-sha1 = "51b4b84d33ec5e0955b55ff4b748b99ce2c3faa9" +deps = ["CompositeTypes", "IntervalSets", "LinearAlgebra", "Random", "StaticArrays"] +git-tree-sha1 = "f30fd5d8e898141f19cc564f00072bb8e2d97d7d" uuid = "5b8099bc-c8ec-5219-889f-1d9e522a28bf" -version = "0.6.7" +version = "0.7.5" [[deps.Downloads]] deps = ["ArgTools", "FileWatching", "LibCURL", "NetworkOptions"] @@ -494,12 +422,6 @@ git-tree-sha1 = "b3f2ff58735b5f024c392fde763f29b057e4b025" uuid = "429591f6-91af-11e9-00e2-59fbe8cec110" version = "2.2.8" -[[deps.ExceptionUnwrapping]] -deps = ["Test"] -git-tree-sha1 = "dcb08a0d93ec0b1cdc4af184b26b591e9695423a" -uuid = "460bff9d-24e4-43bc-9d9f-a8973cb893f4" -version = "0.1.10" - [[deps.Expat_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] git-tree-sha1 = "4558ab818dcceaab612d1bb8c19cee87eda2b83c" @@ -546,6 +468,18 @@ git-tree-sha1 = "c5c28c245101bd59154f649e19b038d15901b5dc" uuid = "5789e2e9-d7fb-5bc7-8068-2c6fae9b9549" version = "1.16.2" +[[deps.FilePaths]] +deps = ["FilePathsBase", "MacroTools", "Reexport", "Requires"] +git-tree-sha1 = "919d9412dbf53a2e6fe74af62a73ceed0bce0629" +uuid = "8fc22ac5-c921-52a6-82fd-178b2807b824" +version = "0.8.3" + +[[deps.FilePathsBase]] +deps = ["Compat", "Dates", "Mmap", "Printf", "Test", "UUIDs"] +git-tree-sha1 = "9f00e42f8d99fdde64d40c8ea5d14269a2e2c1aa" +uuid = "48062228-2e41-5def-b9a4-89aafe57970f" +version = "0.9.21" + [[deps.FileWatching]] uuid = "7b1f6079-737a-58dc-b8bc-7a2ca5c1b5ee" @@ -589,6 +523,11 @@ git-tree-sha1 = "21efd19106a55620a188615da6d3d06cd7f6ee03" uuid = "a3f928ae-7b40-5064-980b-68af3947d34b" version = "2.13.93+0" +[[deps.Format]] +git-tree-sha1 = "f3cf88025f6d03c194d73f5d13fee9004a108329" +uuid = "1fa38f19-a742-5d3f-a2b9-30dd87b9d5f8" +version = "1.3.6" + [[deps.Formatting]] deps = ["Printf"] git-tree-sha1 = "8339d61043228fdd3eb658d86c926cb282ae72a8" @@ -646,9 +585,9 @@ uuid = "9fa8497b-333b-5362-9e8d-4d0656e87820" [[deps.GPUArraysCore]] deps = ["Adapt"] -git-tree-sha1 = "2d6ca471a6c7b536127afccfa7564b5b39227fe0" +git-tree-sha1 = "ec632f177c0d990e64d955ccc1b8c04c485a0950" uuid = "46192b85-c4d5-4398-a991-12ede77f4527" -version = "0.1.5" +version = "0.1.6" [[deps.GeoInterface]] deps = ["Extents"] @@ -668,18 +607,6 @@ git-tree-sha1 = "9b02998aba7bf074d14de89f9d37ca24a1a0b046" uuid = "78b55507-aeef-58d4-861c-77aaff3498b1" version = "0.21.0+0" -[[deps.Git]] -deps = ["Git_jll"] -git-tree-sha1 = "51764e6c2e84c37055e846c516e9015b4a291c7d" -uuid = "d7ba0133-e1db-5d97-8f8c-041e4b3a1eb2" -version = "1.3.0" - -[[deps.Git_jll]] -deps = ["Artifacts", "Expat_jll", "JLLWrappers", "LibCURL_jll", "Libdl", "Libiconv_jll", "OpenSSL_jll", "PCRE2_jll", "Zlib_jll"] -git-tree-sha1 = "b30c473c97fcc1e1e44fab8f3e88fd1b89c9e9d1" -uuid = "f8c6e375-362e-5223-8a59-34ff63f689eb" -version = "2.43.0+0" - [[deps.Glib_jll]] deps = ["Artifacts", "Gettext_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Libiconv_jll", "Libmount_jll", "PCRE2_jll", "Zlib_jll"] git-tree-sha1 = "e94c92c7bf4819685eb80186d51c43e71d4afa17" @@ -698,35 +625,17 @@ git-tree-sha1 = "344bf40dcab1073aca04aa0df4fb092f920e4011" uuid = "3b182d85-2403-5c21-9c21-1e1f0cc25472" version = "1.3.14+0" -[[deps.Graphs]] -deps = ["ArnoldiMethod", "Compat", "DataStructures", "Distributed", "Inflate", "LinearAlgebra", "Random", "SharedArrays", "SimpleTraits", "SparseArrays", "Statistics"] -git-tree-sha1 = "899050ace26649433ef1af25bc17a815b3db52b7" -uuid = "86223c79-3864-5bf0-83f7-82e725a168b6" -version = "1.9.0" - [[deps.GridLayoutBase]] deps = ["GeometryBasics", "InteractiveUtils", "Observables"] -git-tree-sha1 = "f57a64794b336d4990d90f80b147474b869b1bc4" +git-tree-sha1 = "af13a277efd8a6e716d79ef635d5342ccb75be61" uuid = "3955a311-db13-416c-9275-1d80ed98e5e9" -version = "0.9.2" +version = "0.10.0" [[deps.Grisu]] git-tree-sha1 = "53bb909d1151e57e2484c3d1b53e19552b887fb2" uuid = "42e2da0e-8278-4e71-bc24-59509adca0fe" version = "1.0.2" -[[deps.Groebner]] -deps = ["AbstractAlgebra", "Combinatorics", "ExprTools", "Logging", "MultivariatePolynomials", "PrecompileTools", "PrettyTables", "Primes", "Printf", "Random", "SIMD", "TimerOutputs"] -git-tree-sha1 = "6b505ef15e55bdc5bb3ddbcfebdff1c9e67081e8" -uuid = "0b43b601-686d-58a3-8a1c-6623616c7cd4" -version = "0.5.1" - -[[deps.GroupsCore]] -deps = ["Markdown", "Random"] -git-tree-sha1 = "6df9cd6ee79fc59feab33f63a1b3c9e95e2461d5" -uuid = "d5909c97-4eac-4ecc-a3dc-fdd0858a4120" -version = "0.4.2" - [[deps.HDF5]] deps = ["Compat", "HDF5_jll", "Libdl", "MPIPreferences", "Mmap", "Preferences", "Printf", "Random", "Requires", "UUIDs"] git-tree-sha1 = "26407bd1c60129062cec9da63dc7d08251544d53" @@ -740,16 +649,10 @@ version = "0.17.1" MPI = "da04e1cc-30fd-572f-bb4f-1f8673147195" [[deps.HDF5_jll]] -deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "LLVMOpenMP_jll", "LazyArtifacts", "LibCURL_jll", "Libdl", "MPICH_jll", "MPIPreferences", "MPItrampoline_jll", "MicrosoftMPI_jll", "OpenMPI_jll", "OpenSSL_jll", "TOML", "Zlib_jll", "libaec_jll"] -git-tree-sha1 = "38c8874692d48d5440d5752d6c74b0c6b0b60739" +deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "LazyArtifacts", "LibCURL_jll", "Libdl", "MPICH_jll", "MPIPreferences", "MPItrampoline_jll", "MicrosoftMPI_jll", "OpenMPI_jll", "OpenSSL_jll", "TOML", "Zlib_jll", "libaec_jll"] +git-tree-sha1 = "e4591176488495bf44d7456bd73179d87d5e6eab" uuid = "0234f1f7-429e-5d53-9886-15a909be8d59" -version = "1.14.2+1" - -[[deps.HTTP]] -deps = ["Base64", "CodecZlib", "ConcurrentUtilities", "Dates", "ExceptionUnwrapping", "Logging", "LoggingExtras", "MbedTLS", "NetworkOptions", "OpenSSL", "Random", "SimpleBufferStream", "Sockets", "URIs", "UUIDs"] -git-tree-sha1 = "ac7b73d562b8f4287c3b67b4c66a5395a19c1ae8" -uuid = "cd3eb016-35fb-5094-929b-558a96fad6f3" -version = "1.10.2" +version = "1.14.3+1" [[deps.HarfBuzz_jll]] deps = ["Artifacts", "Cairo_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "Graphite2_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Pkg"] @@ -763,12 +666,6 @@ git-tree-sha1 = "ca0f6bf568b4bfc807e7537f081c81e35ceca114" uuid = "e33a78d0-f292-5ffc-b300-72abe9b543c8" version = "2.10.0+0" -[[deps.HybridArrays]] -deps = ["LinearAlgebra", "Requires", "StaticArrays"] -git-tree-sha1 = "6c3e57bc26728b99f470b267a437f0d380eac4fc" -uuid = "1baab800-613f-4b0a-84e4-9cd3431bfbb9" -version = "0.4.16" - [[deps.HypergeometricFunctions]] deps = ["DualNumbers", "LinearAlgebra", "OpenLibm_jll", "SpecialFunctions"] git-tree-sha1 = "f218fe3736ddf977e0e772bc9a586b2383da2685" @@ -781,12 +678,6 @@ git-tree-sha1 = "47ac8cc196b81001a711f4b2c12c97372338f00c" uuid = "7073ff75-c697-5162-941a-fcdaad2a7d2a" version = "1.24.2" -[[deps.IOCapture]] -deps = ["Logging", "Random"] -git-tree-sha1 = "8b72179abc660bfab5e28472e019392b97d0985c" -uuid = "b5f81e59-6552-4d32-b1f0-c071b021bf89" -version = "0.2.4" - [[deps.IfElse]] git-tree-sha1 = "debdd00ffef04665ccbb3e150747a77560e8fad1" uuid = "615f187c-cbe4-4ef1-ba3b-2fcf58d6d173" @@ -888,12 +779,6 @@ weakdeps = ["Random", "RecipesBase", "Statistics"] IntervalSetsRecipesBaseExt = "RecipesBase" IntervalSetsStatisticsExt = "Statistics" -[[deps.InverseFunctions]] -deps = ["Test"] -git-tree-sha1 = "68772f49f54b479fa88ace904f6127f0a3bb2e46" -uuid = "3587e190-3f89-42d0-90ee-14403ec27112" -version = "0.1.12" - [[deps.Ipopt]] deps = ["Ipopt_jll", "LinearAlgebra", "MathOptInterface", "OpenBLAS32_jll", "PrecompileTools"] git-tree-sha1 = "6600353576cee7e7388e57e94115f6aee034fb1c" @@ -969,12 +854,6 @@ git-tree-sha1 = "fee018a29b60733876eb557804b5b109dd3dd8a7" uuid = "5ab0869b-81aa-558d-bb23-cbf5423bbe9b" version = "0.6.8" -[[deps.Kronecker]] -deps = ["LinearAlgebra", "NamedDims", "SparseArrays", "StatsBase"] -git-tree-sha1 = "9253429e28cceae6e823bec9ffde12460d79bb38" -uuid = "2c470bb0-bcc8-11e8-3dad-c9649493f05e" -version = "0.5.5" - [[deps.LAME_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] git-tree-sha1 = "f6250b16881adf048549549fba48b1161acdac8c" @@ -1023,17 +902,6 @@ version = "0.16.1" DataFrames = "a93c6f00-e57d-5684-b7b6-d8193f3e46c0" SymEngine = "123dc426-2d89-5057-bbad-38513e3affd8" -[[deps.LatticeRules]] -deps = ["Random"] -git-tree-sha1 = "7f5b02258a3ca0221a6a9710b0a0a2e8fb4957fe" -uuid = "73f95e8e-ec14-4e6a-8b18-0d2e271c4e55" -version = "0.0.1" - -[[deps.LazilyInitializedFields]] -git-tree-sha1 = "8f7f3cabab0fd1800699663533b6d5cb3fc0e612" -uuid = "0e77f7df-68c5-4e49-93ce-4cd80f5598bf" -version = "1.2.2" - [[deps.Lazy]] deps = ["MacroTools"] git-tree-sha1 = "1370f8202dac30758f3c345f9909b97f53d87d3f" @@ -1134,30 +1002,6 @@ git-tree-sha1 = "d76cec8007ec123c2b681269d40f94b053473fcf" uuid = "9b3f67b0-2d00-526e-9884-9e4938f8fb88" version = "0.2.7" -[[deps.LinearMaps]] -deps = ["LinearAlgebra"] -git-tree-sha1 = "9948d6f8208acfebc3e8cf4681362b2124339e7e" -uuid = "7a12625a-238d-50fd-b39a-03d52299707e" -version = "3.11.2" -weakdeps = ["ChainRulesCore", "SparseArrays", "Statistics"] - - [deps.LinearMaps.extensions] - LinearMapsChainRulesCoreExt = "ChainRulesCore" - LinearMapsSparseArraysExt = "SparseArrays" - LinearMapsStatisticsExt = "Statistics" - -[[deps.Literate]] -deps = ["Base64", "IOCapture", "JSON", "REPL"] -git-tree-sha1 = "bad26f1ccd99c553886ec0725e99a509589dcd11" -uuid = "98b081ad-f1c9-55d3-8b20-4c87d4299306" -version = "2.16.1" - -[[deps.LiveServer]] -deps = ["HTTP", "LoggingExtras", "MIMEs", "Pkg", "Sockets", "Test"] -git-tree-sha1 = "24d05efe53436b22a42bf2ae459f47c48b0c2603" -uuid = "16fef848-5104-11e9-1b77-fb7a48bbb589" -version = "1.2.7" - [[deps.LogExpFunctions]] deps = ["DocStringExtensions", "IrrationalConstants", "LinearAlgebra"] git-tree-sha1 = "18144f3e9cbe9b15b070288eef858f71b291ce37" @@ -1177,12 +1021,6 @@ version = "0.3.27" [[deps.Logging]] uuid = "56ddb016-857b-54e1-b83d-db4d58db5568" -[[deps.LoggingExtras]] -deps = ["Dates", "Logging"] -git-tree-sha1 = "c1dd6d7978c12545b4179fb6153b9250c96b0075" -uuid = "e6f89c97-d47a-5376-807f-9c37f3926c36" -version = "1.0.3" - [[deps.LoweredCodeUtils]] deps = ["JuliaInterpreter"] git-tree-sha1 = "31e27f0b0bf0df3e3e951bfcc43fe8c730a219f6" @@ -1195,11 +1033,6 @@ git-tree-sha1 = "1fd0a97409e418b78c53fac671cf4622efdf0f21" uuid = "d00139f3-1899-568f-a2f0-47f597d42d70" version = "5.1.2+0" -[[deps.MIMEs]] -git-tree-sha1 = "65f28ad4b594aebe22157d6fac869786a255b7eb" -uuid = "6c6e2e6c-3030-632d-7369-2d6c69616d65" -version = "0.1.4" - [[deps.MKL_jll]] deps = ["Artifacts", "IntelOpenMP_jll", "JLLWrappers", "LazyArtifacts", "Libdl"] git-tree-sha1 = "72dc3cf284559eb8f53aa593fe62cb33f83ed0c0" @@ -1237,65 +1070,16 @@ uuid = "1914dd2f-81c6-5fcd-8719-6d5c9610ff09" version = "0.5.13" [[deps.Makie]] -deps = ["Animations", "Base64", "CRC32c", "ColorBrewer", "ColorSchemes", "ColorTypes", "Colors", "Contour", "DelaunayTriangulation", "Distributions", "DocStringExtensions", "Downloads", "FFMPEG_jll", "FileIO", "FixedPointNumbers", "Formatting", "FreeType", "FreeTypeAbstraction", "GeometryBasics", "GridLayoutBase", "ImageIO", "InteractiveUtils", "IntervalSets", "Isoband", "KernelDensity", "LaTeXStrings", "LinearAlgebra", "MacroTools", "MakieCore", "Markdown", "MathTeXEngine", "Observables", "OffsetArrays", "Packing", "PlotUtils", "PolygonOps", "PrecompileTools", "Printf", "REPL", "Random", "RelocatableFolders", "Setfield", "ShaderAbstractions", "Showoff", "SignedDistanceFields", "SparseArrays", "StableHashTraits", "Statistics", "StatsBase", "StatsFuns", "StructArrays", "TriplotBase", "UnicodeFun"] -git-tree-sha1 = "35fa3c150cd96fd77417a23965b7037b90d6ffc9" +deps = ["Animations", "Base64", "CRC32c", "ColorBrewer", "ColorSchemes", "ColorTypes", "Colors", "Contour", "DelaunayTriangulation", "Distributions", "DocStringExtensions", "Downloads", "FFMPEG_jll", "FileIO", "FilePaths", "FixedPointNumbers", "Format", "FreeType", "FreeTypeAbstraction", "GeometryBasics", "GridLayoutBase", "ImageIO", "InteractiveUtils", "IntervalSets", "Isoband", "KernelDensity", "LaTeXStrings", "LinearAlgebra", "MacroTools", "MakieCore", "Markdown", "MathTeXEngine", "Observables", "OffsetArrays", "Packing", "PlotUtils", "PolygonOps", "PrecompileTools", "Printf", "REPL", "Random", "RelocatableFolders", "Scratch", "ShaderAbstractions", "Showoff", "SignedDistanceFields", "SparseArrays", "StableHashTraits", "Statistics", "StatsBase", "StatsFuns", "StructArrays", "TriplotBase", "UnicodeFun"] +git-tree-sha1 = "27af6be179c711fb916a597b6644fbb5b80becc0" uuid = "ee78f7c6-11fb-53f2-987a-cfe4a2b5a57a" -version = "0.19.12" +version = "0.20.8" [[deps.MakieCore]] deps = ["Observables", "REPL"] -git-tree-sha1 = "9b11acd07f21c4d035bd4156e789532e8ee2cc70" +git-tree-sha1 = "248b7a4be0f92b497f7a331aed02c1e9a878f46b" uuid = "20f20a25-4f0e-4fdf-b5d1-57303727442b" -version = "0.6.9" - -[[deps.ManifoldDiff]] -deps = ["LinearAlgebra", "ManifoldsBase", "Markdown", "Random", "Requires"] -git-tree-sha1 = "00253856ea75c472c8f9582b6ab75789e0ac3b21" -uuid = "af67fdf4-a580-4b9f-bbec-742ef357defd" -version = "0.3.6" - - [deps.ManifoldDiff.extensions] - ManifoldDiffFiniteDiffExt = "FiniteDiff" - ManifoldDiffFiniteDifferencesExt = "FiniteDifferences" - ManifoldDiffForwardDiffExt = "ForwardDiff" - ManifoldDiffReverseDiffExt = "ReverseDiff" - ManifoldDiffZygoteExt = "Zygote" - - [deps.ManifoldDiff.weakdeps] - FiniteDiff = "6a86dc24-6348-571c-b903-95158fe2bd41" - FiniteDifferences = "26cc04aa-876d-5657-8c51-4c34ba976000" - ForwardDiff = "f6369f11-7733-5829-9624-2563aa707210" - ReverseDiff = "37e2e3b7-166d-5795-8a7a-e32c996b4267" - Zygote = "e88e6eb3-aa80-5325-afca-941959d7151f" - -[[deps.Manifolds]] -deps = ["Distributions", "Einsum", "Graphs", "HybridArrays", "Kronecker", "LinearAlgebra", "ManifoldDiff", "ManifoldsBase", "Markdown", "MatrixEquations", "Quaternions", "Random", "RecursiveArrayTools", "Requires", "SimpleWeightedGraphs", "SpecialFunctions", "StaticArrays", "Statistics", "StatsBase"] -git-tree-sha1 = "bebeb9a7d5970697b16d8cb569012c05d0d1e62a" -uuid = "1cead3c2-87b3-11e9-0ccd-23c62b72b94e" -version = "0.8.81" - - [deps.Manifolds.extensions] - ManifoldsBoundaryValueDiffEqExt = "BoundaryValueDiffEq" - ManifoldsNLsolveExt = "NLsolve" - ManifoldsOrdinaryDiffEqDiffEqCallbacksExt = ["DiffEqCallbacks", "OrdinaryDiffEq"] - ManifoldsOrdinaryDiffEqExt = "OrdinaryDiffEq" - ManifoldsRecipesBaseExt = ["Colors", "RecipesBase"] - ManifoldsTestExt = "Test" - - [deps.Manifolds.weakdeps] - BoundaryValueDiffEq = "764a87c0-6b3e-53db-9096-fe964310641d" - Colors = "5ae59095-9a9b-59fe-a467-6f913c188581" - DiffEqCallbacks = "459566f4-90b8-5000-8ac3-15dfb0a30def" - NLsolve = "2774e3e8-f4cf-5e23-947b-6d7e65073b56" - OrdinaryDiffEq = "1dea7af3-3e70-54e6-95c3-0bf5283fa5ed" - RecipesBase = "3cdcf5f2-1ef4-517c-9805-6587b60abb01" - Test = "8dfed614-e22c-5e08-85e1-65c5234f0b40" - -[[deps.ManifoldsBase]] -deps = ["LinearAlgebra", "Markdown", "Random"] -git-tree-sha1 = "407f8953f36707cb8eccc1b605fbd0756327c25f" -uuid = "3362f125-f0bb-47a3-aa74-596ffd7ef2fb" -version = "0.14.12" +version = "0.7.3" [[deps.MappedArrays]] git-tree-sha1 = "2dab0221fe2b0f2cb6754eaa743cc266339f527e" @@ -1306,12 +1090,6 @@ version = "0.4.2" deps = ["Base64"] uuid = "d6f4376e-aef5-505a-96c1-9c027394607a" -[[deps.MarkdownAST]] -deps = ["AbstractTrees", "Markdown"] -git-tree-sha1 = "465a70f0fc7d443a00dcdc3267a497397b8a3899" -uuid = "d0879d2d-cac2-40c8-9cee-1863dc0c7391" -version = "0.1.2" - [[deps.MathOptInterface]] deps = ["BenchmarkTools", "CodecBzip2", "CodecZlib", "DataStructures", "ForwardDiff", "JSON", "LinearAlgebra", "MutableArithmetics", "NaNMath", "OrderedCollections", "PrecompileTools", "Printf", "SparseArrays", "SpecialFunctions", "Test", "Unicode"] git-tree-sha1 = "e8b98c868029d007102dc5f98986c81f33b0ec37" @@ -1324,12 +1102,6 @@ git-tree-sha1 = "96ca8a313eb6437db5ffe946c457a401bbb8ce1d" uuid = "0a4f8689-d25c-4efe-a92b-7142dfc1aa53" version = "0.5.7" -[[deps.MatrixEquations]] -deps = ["LinearAlgebra", "LinearMaps"] -git-tree-sha1 = "f765b4eda3ea9be8e644b9127809ca5151f3d9ea" -uuid = "99c1a7ee-ab34-5fd5-8076-27c950a045f4" -version = "2.4.2" - [[deps.MbedTLS]] deps = ["Dates", "MbedTLS_jll", "MozillaCACerts_jll", "NetworkOptions", "Random", "Sockets"] git-tree-sha1 = "c067a280ddc25f196b5e7df3877c6b226d390aaf" @@ -1400,17 +1172,11 @@ git-tree-sha1 = "0877504529a3e5c3343c6f8b4c0381e57e4387e4" uuid = "77ba4419-2d1f-58cd-9bb1-8ffee604a2e3" version = "1.0.2" -[[deps.NamedDims]] -deps = ["AbstractFFTs", "ChainRulesCore", "CovarianceEstimation", "LinearAlgebra", "Pkg", "Requires", "Statistics"] -git-tree-sha1 = "dc9144f80a79b302b48c282ad29b1dc2f10a9792" -uuid = "356022a1-0364-5f58-8944-0da4b18d706f" -version = "1.2.1" - [[deps.NamedTrajectories]] -deps = ["CairoMakie", "JLD2", "LaTeXStrings", "Latexify", "OrderedCollections", "Reexport", "Revise", "Unidecode"] -git-tree-sha1 = "72404ced973daa4c3e6598317b88cea37a1a6847" +deps = ["CairoMakie", "JLD2", "LaTeXStrings", "Latexify", "OrderedCollections", "Random", "Reexport", "Revise", "Unidecode"] +git-tree-sha1 = "a109d8dee4055adb47bb435fd479dd67a50776af" uuid = "538bc3a1-5ab9-4fc3-b776-35ca1e893e08" -version = "0.1.4" +version = "0.1.5" [[deps.Netpbm]] deps = ["FileIO", "ImageCore", "ImageMetadata"] @@ -1451,7 +1217,7 @@ version = "0.3.24+0" [[deps.OpenBLAS_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "Libdl"] uuid = "4536629a-c528-5b80-bd46-f80d51c5b363" -version = "0.3.23+2" +version = "0.3.23+4" [[deps.OpenEXR]] deps = ["Colors", "FileIO", "OpenEXR_jll"] @@ -1471,16 +1237,10 @@ uuid = "05823500-19ac-5b8b-9628-191a04bc5112" version = "0.8.1+2" [[deps.OpenMPI_jll]] -deps = ["Artifacts", "CompilerSupportLibraries_jll", "Hwloc_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "MPIPreferences", "PMIx_jll", "TOML", "Zlib_jll", "libevent_jll", "prrte_jll"] -git-tree-sha1 = "f46caf663e069027a06942d00dced37f1eb3d8ad" +deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "MPIPreferences", "TOML"] +git-tree-sha1 = "e25c1778a98e34219a00455d6e4384e017ea9762" uuid = "fe0851c0-eecd-5654-98d4-656369965a5c" -version = "5.0.2+0" - -[[deps.OpenSSL]] -deps = ["BitFlags", "Dates", "MozillaCACerts_jll", "OpenSSL_jll", "Sockets"] -git-tree-sha1 = "51901a49222b09e3743c65b8847687ae5fc78eb2" -uuid = "4d8831e6-92b7-49fb-bdf8-b643e874388c" -version = "1.4.1" +version = "4.1.6+0" [[deps.OpenSSL_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] @@ -1522,12 +1282,6 @@ git-tree-sha1 = "949347156c25054de2db3b166c52ac4728cbad65" uuid = "90014a1f-27ba-587c-ab20-58faa44d9150" version = "0.11.31" -[[deps.PMIx_jll]] -deps = ["Artifacts", "Hwloc_jll", "JLLWrappers", "Libdl", "Zlib_jll", "libevent_jll"] -git-tree-sha1 = "8b3b19351fa24791f94d7ae85faf845ca1362541" -uuid = "32165bc3-0280-59bc-8c0b-c33b6203efab" -version = "4.2.7+0" - [[deps.PNGFiles]] deps = ["Base64", "CEnum", "ImageCore", "IndirectArrays", "OffsetArrays", "libpng_jll"] git-tree-sha1 = "67186a2bc9a90f9f85ff3cc8277868961fb57cbd" @@ -1647,12 +1401,6 @@ git-tree-sha1 = "00805cd429dcb4870060ff49ef443486c262e38e" uuid = "21216c6a-2e73-6563-6e65-726566657250" version = "1.4.1" -[[deps.PrettyTables]] -deps = ["Crayons", "LaTeXStrings", "Markdown", "PrecompileTools", "Printf", "Reexport", "StringManipulation", "Tables"] -git-tree-sha1 = "88b895d13d53b5577fd53379d913b9ab9ac82660" -uuid = "08abe8d2-0d0c-5749-adfa-8a2ac140af0d" -version = "2.3.1" - [[deps.Primes]] deps = ["IntegerMathUtils"] git-tree-sha1 = "cb420f77dc474d23ee47ca8d14c90810cafe69e7" @@ -1686,26 +1434,10 @@ uuid = "1fd47b50-473d-5c70-9696-f719f8f3bcdc" version = "2.9.4" [[deps.QuantumCollocation]] -deps = ["BenchmarkTools", "CairoMakie", "Colors", "Distributions", "Einsum", "ExponentialAction", "ForwardDiff", "HDF5", "IJulia", "Ipopt", "JLD2", "LaTeXStrings", "Libdl", "LinearAlgebra", "Manifolds", "MathOptInterface", "NamedTrajectories", "Random", "Reexport", "Revise", "SparseArrays", "Symbolics", "TrajectoryIndexingUtils"] -git-tree-sha1 = "1573902e7890034656449bb795f032eef61cadf1" +deps = ["Arpack", "BenchmarkTools", "CairoMakie", "Colors", "Distributions", "Einsum", "ExponentialAction", "ForwardDiff", "HDF5", "IJulia", "Ipopt", "JLD2", "LaTeXStrings", "Libdl", "LinearAlgebra", "MathOptInterface", "NamedTrajectories", "OrderedCollections", "Random", "Reexport", "Revise", "SparseArrays", "Symbolics", "TrajectoryIndexingUtils"] +path = ".." uuid = "0dc23a59-5ffb-49af-b6bd-932a8ae77adf" -version = "0.1.5" - -[[deps.QuasiMonteCarlo]] -deps = ["Accessors", "ConcreteStructs", "LatticeRules", "LinearAlgebra", "Primes", "Random", "Requires", "Sobol", "StatsBase"] -git-tree-sha1 = "cc086f8485bce77b6187141e1413c3b55f9a4341" -uuid = "8a4e6c94-4038-4cdc-81c3-7e6ffdb2a71b" -version = "0.3.3" -weakdeps = ["Distributions"] - - [deps.QuasiMonteCarlo.extensions] - QuasiMonteCarloDistributionsExt = "Distributions" - -[[deps.Quaternions]] -deps = ["LinearAlgebra", "Random", "RealDot"] -git-tree-sha1 = "994cc27cdacca10e68feb291673ec3a76aa2fae9" -uuid = "94ee1d12-ae83-5a48-8b1c-48b8ff168ae0" -version = "0.7.6" +version = "0.2.0" [[deps.REPL]] deps = ["InteractiveUtils", "Markdown", "Sockets", "Unicode"] @@ -1715,12 +1447,6 @@ uuid = "3fa0cd96-eef1-5676-8a61-b3b8758bbffb" deps = ["SHA"] uuid = "9a3f8284-a2c9-5f02-9a11-845980a1fd5c" -[[deps.RandomExtensions]] -deps = ["Random", "SparseArrays"] -git-tree-sha1 = "b8a399e95663485820000f26b6a43c794e166a49" -uuid = "fb686558-2515-59ef-acaa-46db3789a887" -version = "0.4.4" - [[deps.RangeArrays]] git-tree-sha1 = "b9039e93773ddcfc828f12aadf7115b4b4d225f5" uuid = "b3c3ace0-ae52-54e7-9d0b-2c1406fd6b9d" @@ -1736,12 +1462,6 @@ weakdeps = ["FixedPointNumbers"] [deps.Ratios.extensions] RatiosFixedPointNumbersExt = "FixedPointNumbers" -[[deps.RealDot]] -deps = ["LinearAlgebra"] -git-tree-sha1 = "9f0a1b71baaf7650f4fa8a1d168c7fb6ee41f0c9" -uuid = "c1ae055f-0cd5-4b69-90a6-9a35b1a98df9" -version = "0.1.0" - [[deps.RecipesBase]] deps = ["PrecompileTools"] git-tree-sha1 = "5c3d09cc4f31f5fc6af001c250bf1278733100ff" @@ -1749,20 +1469,26 @@ uuid = "3cdcf5f2-1ef4-517c-9805-6587b60abb01" version = "1.3.4" [[deps.RecursiveArrayTools]] -deps = ["Adapt", "ArrayInterface", "DocStringExtensions", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "Requires", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables"] -git-tree-sha1 = "d7087c013e8a496ff396bae843b1e16d9a30ede8" +deps = ["Adapt", "ArrayInterface", "DocStringExtensions", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "SparseArrays", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables"] +git-tree-sha1 = "1bbc4bb050165cc57ca2876cd53cc23395948650" uuid = "731186ca-8d62-57ce-b412-fbd966d074cd" -version = "2.38.10" +version = "3.10.0" [deps.RecursiveArrayTools.extensions] + RecursiveArrayToolsFastBroadcastExt = "FastBroadcast" + RecursiveArrayToolsForwardDiffExt = "ForwardDiff" RecursiveArrayToolsMeasurementsExt = "Measurements" RecursiveArrayToolsMonteCarloMeasurementsExt = "MonteCarloMeasurements" + RecursiveArrayToolsReverseDiffExt = ["ReverseDiff", "Zygote"] RecursiveArrayToolsTrackerExt = "Tracker" RecursiveArrayToolsZygoteExt = "Zygote" [deps.RecursiveArrayTools.weakdeps] + FastBroadcast = "7034ab61-46d4-4ed7-9d0f-46aef9175898" + ForwardDiff = "f6369f11-7733-5829-9624-2563aa707210" Measurements = "eff96d63-e80a-5855-80a2-b1b0885c5ab7" MonteCarloMeasurements = "0987c9cc-fe09-11e8-30f0-b96dd679fdca" + ReverseDiff = "37e2e3b7-166d-5795-8a7a-e32c996b4267" Tracker = "9f7883ad-71c0-57eb-9f7f-b5c9e6d3789c" Zygote = "e88e6eb3-aa80-5325-afca-941959d7151f" @@ -1771,12 +1497,6 @@ git-tree-sha1 = "45e428421666073eab6f2da5c9d310d99bb12f9b" uuid = "189a3867-3050-52da-a836-e630ba90ab69" version = "1.2.2" -[[deps.RegistryInstances]] -deps = ["LazilyInitializedFields", "Pkg", "TOML", "Tar"] -git-tree-sha1 = "ffd19052caf598b8653b99404058fce14828be51" -uuid = "2792f1a3-b283-48e8-9a74-f99dce5104f3" -version = "0.1.0" - [[deps.RelocatableFolders]] deps = ["SHA", "Scratch"] git-tree-sha1 = "ffdaf70d81cf6ff22c2b6e733c900c3321cab864" @@ -1828,12 +1548,6 @@ version = "0.5.12" uuid = "ea8e919c-243c-51af-8825-aaa63cd721ce" version = "0.7.0" -[[deps.SIMD]] -deps = ["PrecompileTools"] -git-tree-sha1 = "d8911cc125da009051fb35322415641d02d9e37f" -uuid = "fdea26ae-647d-5447-a871-4b548cad5224" -version = "3.4.6" - [[deps.SPRAL_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "Hwloc_jll", "JLLWrappers", "Libdl", "METIS_jll", "libblastrampoline_jll"] git-tree-sha1 = "34b9dacd687cace8aa4d550e3e9bb8615f1a61e9" @@ -1841,13 +1555,14 @@ uuid = "319450e9-13b8-58e8-aa9f-8fd1420848ab" version = "2024.1.18+0" [[deps.SciMLBase]] -deps = ["ADTypes", "ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FillArrays", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PrecompileTools", "Preferences", "Printf", "QuasiMonteCarlo", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "TruncatedStacktraces"] -git-tree-sha1 = "32ea825941f7b58a6f48268f4b76971ae8eb9eec" +deps = ["ADTypes", "ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FillArrays", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PrecompileTools", "Preferences", "Printf", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "TruncatedStacktraces"] +git-tree-sha1 = "16dd1ea058e1c080d7f1ba47a9094f87a1c50e4c" uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462" -version = "2.10.0" +version = "2.26.2" [deps.SciMLBase.extensions] SciMLBaseChainRulesCoreExt = "ChainRulesCore" + SciMLBaseMakieExt = "Makie" SciMLBasePartialFunctionsExt = "PartialFunctions" SciMLBasePyCallExt = "PyCall" SciMLBasePythonCallExt = "PythonCall" @@ -1857,6 +1572,7 @@ version = "2.10.0" [deps.SciMLBase.weakdeps] ChainRules = "082447d4-558c-5d27-93f4-14fc19e9eca2" ChainRulesCore = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" + Makie = "ee78f7c6-11fb-53f2-987a-cfe4a2b5a57a" PartialFunctions = "570af359-4316-4cb7-8c74-252c00c2016b" PyCall = "438e738f-606a-5dbb-bf0a-cddfbfd45ab0" PythonCall = "6099a3de-0909-46bc-b1f4-468b9a2dfc0d" @@ -1906,11 +1622,6 @@ git-tree-sha1 = "d263a08ec505853a5ff1c1ebde2070419e3f28e9" uuid = "73760f76-fbc4-59ce-8f25-708e95d2df96" version = "0.4.0" -[[deps.SimpleBufferStream]] -git-tree-sha1 = "874e8867b33a00e784c8a7e4b60afe9e037b74e1" -uuid = "777ac1f9-54b0-4bf8-805c-2214025038e7" -version = "1.1.0" - [[deps.SimpleGraphs]] deps = ["AbstractLattices", "Combinatorics", "DataStructures", "IterTools", "LightXML", "LinearAlgebra", "LinearAlgebraX", "Optim", "Primes", "Random", "RingLists", "SimplePartitions", "SimplePolynomials", "SimpleRandom", "SparseArrays", "Statistics"] git-tree-sha1 = "f65caa24a622f985cc341de81d3f9744435d0d0f" @@ -1941,24 +1652,12 @@ git-tree-sha1 = "5d7e3f4e11935503d3ecaf7186eac40602e7d231" uuid = "699a6c99-e7fa-54fc-8d76-47d257e15c1d" version = "0.9.4" -[[deps.SimpleWeightedGraphs]] -deps = ["Graphs", "LinearAlgebra", "Markdown", "SparseArrays"] -git-tree-sha1 = "4b33e0e081a825dbfaf314decf58fa47e53d6acb" -uuid = "47aef6b3-ad0c-573a-a1e2-d07658019622" -version = "1.4.0" - [[deps.Sixel]] deps = ["Dates", "FileIO", "ImageCore", "IndirectArrays", "OffsetArrays", "REPL", "libsixel_jll"] git-tree-sha1 = "2da10356e31327c7096832eb9cd86307a50b1eb6" uuid = "45858cf5-a6b0-47a3-bbea-62219f50df47" version = "0.1.3" -[[deps.Sobol]] -deps = ["DelimitedFiles", "Random"] -git-tree-sha1 = "5a74ac22a9daef23705f010f72c81d6925b19df8" -uuid = "ed01d8cd-4d21-5b2a-85b4-cc3bdc58bad4" -version = "1.5.0" - [[deps.Sockets]] uuid = "6462fe0b-24de-5631-8697-dd941f90decc" @@ -2039,17 +1738,14 @@ deps = ["HypergeometricFunctions", "IrrationalConstants", "LogExpFunctions", "Re git-tree-sha1 = "cef0472124fab0695b58ca35a77c6fb942fdab8a" uuid = "4c63d2b9-4356-54db-8cca-17b64c39e42c" version = "1.3.1" -weakdeps = ["ChainRulesCore", "InverseFunctions"] [deps.StatsFuns.extensions] StatsFunsChainRulesCoreExt = "ChainRulesCore" StatsFunsInverseFunctionsExt = "InverseFunctions" -[[deps.StringManipulation]] -deps = ["PrecompileTools"] -git-tree-sha1 = "a04cabe79c5f01f4d723cc6704070ada0b9d46d5" -uuid = "892a3eda-7b42-436c-8928-eab12a02cf0e" -version = "0.3.4" + [deps.StatsFuns.weakdeps] + ChainRulesCore = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" + InverseFunctions = "3587e190-3f89-42d0-90ee-14403ec27112" [[deps.StructArrays]] deps = ["ConstructionBase", "DataAPI", "Tables"] @@ -2074,27 +1770,30 @@ uuid = "bea87d4a-7f5b-5778-9afe-8cc45184846c" version = "7.2.1+1" [[deps.SymbolicIndexingInterface]] -deps = ["DocStringExtensions"] -git-tree-sha1 = "f8ab052bfcbdb9b48fad2c80c873aa0d0344dfe5" +git-tree-sha1 = "b74cb9508b6c0aa91d729dcbc7e35faf8998c549" uuid = "2efcf032-c050-4f8e-a9bb-153293bab1f5" -version = "0.2.2" +version = "0.3.7" [[deps.SymbolicUtils]] -deps = ["AbstractTrees", "Bijections", "ChainRulesCore", "Combinatorics", "ConstructionBase", "DataStructures", "DocStringExtensions", "DynamicPolynomials", "IfElse", "LabelledArrays", "LinearAlgebra", "MultivariatePolynomials", "NaNMath", "Setfield", "SparseArrays", "SpecialFunctions", "StaticArrays", "TimerOutputs", "Unityper"] -git-tree-sha1 = "2f3fa844bcd33e40d8c29de5ee8dded7a0a70422" +deps = ["AbstractTrees", "Bijections", "ChainRulesCore", "Combinatorics", "ConstructionBase", "DataStructures", "DocStringExtensions", "DynamicPolynomials", "IfElse", "LabelledArrays", "LinearAlgebra", "MultivariatePolynomials", "NaNMath", "Setfield", "SparseArrays", "SpecialFunctions", "StaticArrays", "SymbolicIndexingInterface", "TimerOutputs", "Unityper"] +git-tree-sha1 = "849b1dfb1680a9e9f2c6023f79a49b694fb6d0da" uuid = "d1185830-fcd6-423d-90d6-eec64667417b" -version = "1.4.0" +version = "1.5.0" [[deps.Symbolics]] -deps = ["ArrayInterface", "Bijections", "ConstructionBase", "DataStructures", "DiffRules", "Distributions", "DocStringExtensions", "DomainSets", "DynamicPolynomials", "Groebner", "IfElse", "LaTeXStrings", "LambertW", "Latexify", "Libdl", "LinearAlgebra", "LogExpFunctions", "MacroTools", "Markdown", "NaNMath", "PrecompileTools", "RecipesBase", "RecursiveArrayTools", "Reexport", "Requires", "RuntimeGeneratedFunctions", "SciMLBase", "Setfield", "SparseArrays", "SpecialFunctions", "StaticArrays", "SymbolicUtils"] -git-tree-sha1 = "28f55dcd865e4a97f262fc476306cee14e8d4651" +deps = ["ArrayInterface", "Bijections", "ConstructionBase", "DataStructures", "DiffRules", "Distributions", "DocStringExtensions", "DomainSets", "DynamicPolynomials", "ForwardDiff", "IfElse", "LaTeXStrings", "LambertW", "Latexify", "Libdl", "LinearAlgebra", "LogExpFunctions", "MacroTools", "Markdown", "NaNMath", "PrecompileTools", "RecipesBase", "Reexport", "Requires", "RuntimeGeneratedFunctions", "SciMLBase", "Setfield", "SparseArrays", "SpecialFunctions", "StaticArrays", "SymbolicIndexingInterface", "SymbolicUtils"] +git-tree-sha1 = "0cad5780cc4c0f02ca1c27f68231526131c4537e" uuid = "0c5d862f-8b57-4792-8d23-62f2024744c7" -version = "5.11.0" +version = "5.21.0" [deps.Symbolics.extensions] + SymbolicsGroebnerExt = "Groebner" + SymbolicsPreallocationToolsExt = "PreallocationTools" SymbolicsSymPyExt = "SymPy" [deps.Symbolics.weakdeps] + Groebner = "0b43b601-686d-58a3-8a1c-6623616c7cd4" + PreallocationTools = "d236fae5-4411-538c-8e31-a6e3d9e00b46" SymPy = "24249f21-da20-56a4-8eb1-6a02cf4ae2e6" [[deps.TOML]] @@ -2102,12 +1801,6 @@ deps = ["Dates"] uuid = "fa267f1f-6049-4f14-aa54-33bafae1ed76" version = "1.0.3" -[[deps.TSVD]] -deps = ["Adapt", "LinearAlgebra"] -git-tree-sha1 = "61cd1ce64b4ffb69e2d156ff7166a8eb796d699a" -uuid = "9449cd9e-2762-5aa3-a617-5413e99d722e" -version = "0.4.3" - [[deps.TableTraits]] deps = ["IteratorInterfaceExtensions"] git-tree-sha1 = "c06b2f539df1c6efa794486abfb6ed2022561a39" @@ -2182,11 +1875,6 @@ git-tree-sha1 = "41d61b1c545b06279871ef1a4b5fcb2cac2191cd" uuid = "9d95972d-f1c8-5527-a6e0-b4b365fa01f6" version = "1.5.0" -[[deps.URIs]] -git-tree-sha1 = "67db6cc7b3821e19ebe75791a9dd19c9b1188f2b" -uuid = "5c2747f8-b7ea-4ff2-ba2e-563bfd36b1d4" -version = "1.5.1" - [[deps.UUIDs]] deps = ["Random", "SHA"] uuid = "cf7118a7-6976-5b1a-9a39-7adc72f591a4" @@ -2334,12 +2022,6 @@ deps = ["Artifacts", "Libdl"] uuid = "8e850b90-86db-534c-a0d3-1478176c7d93" version = "5.8.0+1" -[[deps.libevent_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "OpenSSL_jll"] -git-tree-sha1 = "f04ec6d9a186115fb38f858f05c0c4e1b7fc9dcb" -uuid = "1080aeaf-3a6a-583e-a51c-c537b09f60ec" -version = "2.1.13+1" - [[deps.libfdk_aac_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] git-tree-sha1 = "daacc84a041563f965be61859a36e17c4e4fcd55" @@ -2380,12 +2062,6 @@ deps = ["Artifacts", "Libdl"] uuid = "3f19e933-33d8-53b3-aaab-bd5110c3b7a0" version = "17.4.0+2" -[[deps.prrte_jll]] -deps = ["Artifacts", "Hwloc_jll", "JLLWrappers", "Libdl", "PMIx_jll", "libevent_jll"] -git-tree-sha1 = "5adb2d7a18a30280feb66cad6f1a1dfdca2dc7b0" -uuid = "eb928a42-fffd-568d-ab9c-3f5d54fc65b9" -version = "3.0.2+0" - [[deps.x264_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] git-tree-sha1 = "4fea590b89e6ec504593146bf8b988b2c00922b2" diff --git a/docs/Project.toml b/docs/Project.toml index 7aab9bae..6b1fc3e7 100644 --- a/docs/Project.toml +++ b/docs/Project.toml @@ -1,8 +1,3 @@ [deps] -Documenter = "e30172f5-a6a5-5a46-863b-614d45cd2de4" -Literate = "98b081ad-f1c9-55d3-8b20-4c87d4299306" -LiveServer = "16fef848-5104-11e9-1b77-fb7a48bbb589" NamedTrajectories = "538bc3a1-5ab9-4fc3-b776-35ca1e893e08" QuantumCollocation = "0dc23a59-5ffb-49af-b6bd-932a8ae77adf" -Revise = "295af30f-e4ad-537b-8983-00126c2a3abe" -TrajectoryIndexingUtils = "6dad8b7f-dd9a-4c28-9b70-85b9a079bfc8" \ No newline at end of file