DESCRIPTION

Package: phylofactor
Type: Package
Title: phylofactor
Version: 0.0.1
Date: 2018-01-08
Author: Alex Washburne
Authors@R: person("Alex","Washburne",email="bigalculus@gmail.com",role=c("aut","cre"))
Maintainer: Alex Washburne <bigalculus@gmail.com>
Description: Phylogenetic factorization This package allows users to identify clades of interest through a series of independent regressions on groups defined by phylogeny. There are many functions to assist the listing and visualization of phylofactorizations. See Washburne et al. (2017),(2019) for more details.
License: GPL-3
LazyData: TRUE
Depends:
  ape (>= 3.4),
  magrittr (>= 1.5),
  data.table (>= 1.10.4),
  Matrix (>= 1.2-15),
  R (>= 2.10)
Imports:
  phangorn (>= 2.0.2),
  stats (>= 3.2.2),
  graphics (>= 3.2.2),
  grDevices(>= 3.2.2),
  caper (>= 0.5.2),
  Biostrings (>= 2.38.4),
  mgcv (>= 1.8-16),
  ggplot2 (>= 2.2.1),
  ggtree (>= 1.8.2),
  parallel (>= 3.2.2),
  viridis (>= 0.4.0),
  tidyverse (>= 1.2.1)
Suggests: 
  testthat (>= 1.0.2),
RoxygenNote: 6.1.1