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Add option for adapter trimming (NGmerge vs trimmomatic) #9

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4 of 6 tasks
sroener opened this issue Feb 8, 2022 · 0 comments
Closed
4 of 6 tasks

Add option for adapter trimming (NGmerge vs trimmomatic) #9

sroener opened this issue Feb 8, 2022 · 0 comments
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@sroener
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sroener commented Feb 8, 2022

  • move trimming/merging to separate rule
  • add option to config for selecting trimming program
  • add option for length filtering
  • add rule for selecting which files are needed for mapping
  • add rule for trimmomatik
  • add option to configure sequencing platform (needs function)
@sroener sroener self-assigned this Feb 8, 2022
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