From 16f25b58d4de8ecfd20a6c0d90181702b97fff3a Mon Sep 17 00:00:00 2001
From: edgar <edgar.riba@gmail.com>
Date: Sun, 24 Mar 2024 20:51:50 +0100
Subject: [PATCH 1/2] implement std mean

---
 Cargo.lock           |   71 +-
 Cargo.toml           |    6 +-
 examples/std_mean.rs |   93 +++
 py-kornia/Cargo.lock | 1596 ------------------------------------------
 src/core.rs          |   78 +++
 src/lib.rs           |    1 +
 6 files changed, 231 insertions(+), 1614 deletions(-)
 create mode 100644 examples/std_mean.rs
 delete mode 100644 py-kornia/Cargo.lock
 create mode 100644 src/core.rs

diff --git a/Cargo.lock b/Cargo.lock
index c995139e..7ecdf8dc 100644
--- a/Cargo.lock
+++ b/Cargo.lock
@@ -1071,9 +1071,9 @@ dependencies = [
 
 [[package]]
 name = "clap"
-version = "4.4.18"
+version = "4.5.3"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "1e578d6ec4194633722ccf9544794b71b1385c3c027efe0c55db226fc880865c"
+checksum = "949626d00e063efc93b6dca932419ceb5432f99769911c0b995f7e884c778813"
 dependencies = [
  "clap_builder",
  "clap_derive",
@@ -1081,9 +1081,9 @@ dependencies = [
 
 [[package]]
 name = "clap_builder"
-version = "4.4.18"
+version = "4.5.2"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "4df4df40ec50c46000231c914968278b1eb05098cf8f1b3a518a95030e71d1c7"
+checksum = "ae129e2e766ae0ec03484e609954119f123cc1fe650337e155d03b022f24f7b4"
 dependencies = [
  "anstream",
  "anstyle",
@@ -1093,11 +1093,11 @@ dependencies = [
 
 [[package]]
 name = "clap_derive"
-version = "4.4.7"
+version = "4.5.3"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "cf9804afaaf59a91e75b022a30fb7229a7901f60c755489cc61c9b423b836442"
+checksum = "90239a040c80f5e14809ca132ddc4176ab33d5e17e49691793296e3fcb34d72f"
 dependencies = [
- "heck",
+ "heck 0.5.0",
  "proc-macro2",
  "quote",
  "syn 2.0.48",
@@ -1105,9 +1105,9 @@ dependencies = [
 
 [[package]]
 name = "clap_lex"
-version = "0.6.0"
+version = "0.7.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "702fc72eb24e5a1e48ce58027a675bc24edd52096d5397d4aea7c6dd9eca0bd1"
+checksum = "98cc8fbded0c607b7ba9dd60cd98df59af97e84d24e49c8557331cfc26d301ce"
 
 [[package]]
 name = "clean-path"
@@ -1257,6 +1257,7 @@ dependencies = [
  "encode_unicode",
  "lazy_static",
  "libc",
+ "unicode-width",
  "windows-sys 0.52.0",
 ]
 
@@ -2652,6 +2653,12 @@ version = "0.4.1"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "95505c38b4572b2d910cecb0281560f54b440a19336cbbcb27bf6ce6adc6f5a8"
 
+[[package]]
+name = "heck"
+version = "0.5.0"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "2304e00983f87ffb38b55b444b5e3b60a884b5d30c0fca7d82fe33449bbe55ea"
+
 [[package]]
 name = "hermit-abi"
 version = "0.3.4"
@@ -2840,6 +2847,20 @@ dependencies = [
  "hashbrown",
 ]
 
+[[package]]
+name = "indicatif"
+version = "0.17.8"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "763a5a8f45087d6bcea4222e7b72c291a054edf80e4ef6efd2a4979878c7bea3"
+dependencies = [
+ "console",
+ "instant",
+ "number_prefix",
+ "portable-atomic",
+ "rayon",
+ "unicode-width",
+]
+
 [[package]]
 name = "infer"
 version = "0.15.0"
@@ -3010,15 +3031,19 @@ version = "0.1.2"
 dependencies = [
  "anyhow",
  "candle-core",
+ "clap",
  "criterion",
  "fast_image_resize",
  "image 0.25.0",
+ "indicatif",
  "memmap2 0.9.4",
  "ndarray",
  "num-traits",
+ "rayon",
  "rerun",
  "tempfile",
  "turbojpeg",
+ "walkdir",
 ]
 
 [[package]]
@@ -3616,6 +3641,12 @@ dependencies = [
  "libc",
 ]
 
+[[package]]
+name = "number_prefix"
+version = "0.4.0"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "830b246a0e5f20af87141b25c173cd1b609bd7779a4617d6ec582abaf90870f3"
+
 [[package]]
 name = "objc"
 version = "0.2.7"
@@ -3994,6 +4025,12 @@ version = "0.3.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "22686f4785f02a4fcc856d3b3bb19bf6c8160d103f7a99cc258bddd0251dc7f2"
 
+[[package]]
+name = "portable-atomic"
+version = "1.6.0"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "7170ef9988bc169ba16dd36a7fa041e5c4cbeb6a35b76d4c03daded371eae7c0"
+
 [[package]]
 name = "powerfmt"
 version = "0.2.0"
@@ -4313,9 +4350,9 @@ checksum = "60a357793950651c4ed0f3f52338f53b2f809f32d83a07f72909fa13e4c6c1e3"
 
 [[package]]
 name = "rayon"
-version = "1.8.1"
+version = "1.10.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "fa7237101a77a10773db45d62004a272517633fbcc3df19d96455ede1122e051"
+checksum = "b418a60154510ca1a002a752ca9714984e21e4241e804d32555251faf8b78ffa"
 dependencies = [
  "either",
  "rayon-core",
@@ -5955,9 +5992,9 @@ checksum = "9e08d8363704e6c71fc928674353e6b7c23dcea9d82d7012c8faf2a3a025f8d0"
 
 [[package]]
 name = "strsim"
-version = "0.10.0"
+version = "0.11.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "73473c0e59e6d5812c5dfe2a064a6444949f089e20eec9a2e5506596494e4623"
+checksum = "5ee073c9e4cd00e28217186dbe12796d692868f432bf2e97ee73bed0c56dfa01"
 
 [[package]]
 name = "strum"
@@ -5974,7 +6011,7 @@ version = "0.25.3"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "23dc1fa9ac9c169a78ba62f0b841814b7abae11bdd047b9c58f893439e309ea0"
 dependencies = [
- "heck",
+ "heck 0.4.1",
  "proc-macro2",
  "quote",
  "rustversion",
@@ -6042,7 +6079,7 @@ source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "2a2d580ff6a20c55dfb86be5f9c238f67835d0e81cbdea8bf5680e0897320331"
 dependencies = [
  "cfg-expr",
- "heck",
+ "heck 0.4.1",
  "pkg-config",
  "toml 0.8.10",
  "version-compare",
@@ -6560,9 +6597,9 @@ checksum = "f3c4517f54858c779bbcbf228f4fca63d121bf85fbecb2dc578cdf4a39395690"
 
 [[package]]
 name = "walkdir"
-version = "2.4.0"
+version = "2.5.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "d71d857dc86794ca4c280d616f7da00d2dbfd8cd788846559a6813e6aa4b54ee"
+checksum = "29790946404f91d9c5d06f9874efddea1dc06c5efe94541a7d6863108e3a5e4b"
 dependencies = [
  "same-file",
  "winapi-util",
diff --git a/Cargo.toml b/Cargo.toml
index 325e9b4a..195a37f2 100644
--- a/Cargo.toml
+++ b/Cargo.toml
@@ -21,9 +21,13 @@ fast_image_resize = "3.0.4"
 candle-core = { version = "0.3.2", optional = true }
 
 [dev-dependencies]
+clap = { version = "4.5.3", features = ["derive"] }
+criterion = { version = "0.5.1", features = ["html_reports"] }
+indicatif = { version = "0.17.8", features = ["rayon"] }
 tempfile = "3.9.0"
+rayon = "1.10.0"
 rerun = "0.14.1"
-criterion = { version = "0.5.1", features = ["html_reports"] }
+walkdir = "2.5.0"
 
 [features]
 candle = ["candle-core"]
diff --git a/examples/std_mean.rs b/examples/std_mean.rs
new file mode 100644
index 00000000..aee2fb35
--- /dev/null
+++ b/examples/std_mean.rs
@@ -0,0 +1,93 @@
+use std::path::PathBuf;
+
+use anyhow::Result;
+use clap::Parser;
+use indicatif::{ParallelProgressIterator, ProgressStyle};
+use rayon::iter::{IntoParallelRefIterator, ParallelIterator};
+
+use kornia_rs::io::functional as F;
+
+#[derive(Parser, Debug)]
+struct Args {
+    #[arg(short, long)]
+    images_dir: PathBuf,
+
+    #[arg(short, long, default_value = "8")]
+    num_threads: usize,
+}
+
+fn main() -> Result<()> {
+    let args = Args::parse();
+
+    rayon::ThreadPoolBuilder::new()
+        .num_threads(args.num_threads)
+        .build_global()
+        .expect("Failed to build thread pool");
+
+    // Walk through the images directory and collect the paths of the images
+    let images_paths: Vec<PathBuf> = walkdir::WalkDir::new(&args.images_dir)
+        .into_iter()
+        .filter_map(|entry| entry.ok())
+        .filter(|entry| {
+            entry.file_type().is_file()
+                && entry
+                    .path()
+                    .extension()
+                    .map(|ext| ext == "jpeg")
+                    .unwrap_or(false)
+        })
+        .map(|entry| entry.path().to_path_buf())
+        .collect();
+
+    if images_paths.is_empty() {
+        println!("No images found in the directory");
+        return Ok(());
+    }
+
+    println!(
+        "🚀 Found {} images. Starting to compute the std and mean !!!",
+        images_paths.len()
+    );
+
+    // Create a progress bar
+    let pb = indicatif::ProgressBar::new(images_paths.len() as u64);
+    pb.set_style(ProgressStyle::default_bar().template(
+        "{spinner:.green} [{elapsed_precise}] [{bar:40.cyan/blue}] {pos:>7}/{len:7} ({eta}) {msg} {per_sec} img/sec",
+    )?.progress_chars("##>-"));
+
+    // compute the std and mean of the images
+    let (total_std, total_mean) = images_paths
+        .par_iter()
+        .progress_with(pb)
+        .map(|image_path| {
+            // read the image
+            let image = F::read_image_jpeg(image_path).expect("Failed to read image");
+            // compute the std and mean
+            kornia_rs::core::std_mean(&image)
+        })
+        .reduce(
+            || (vec![0.0; 3], vec![0.0; 3]),
+            |(mut total_std, mut total_mean), (std, mean)| {
+                total_std
+                    .iter_mut()
+                    .zip(std.iter())
+                    .for_each(|(t, s)| *t += s);
+                total_mean
+                    .iter_mut()
+                    .zip(mean.iter())
+                    .for_each(|(t, m)| *t += m);
+
+                (total_std, total_mean)
+            },
+        );
+
+    // average the measurements
+    let n = images_paths.len() as f64;
+    let total_std = total_std.iter().map(|&s| s / n).collect::<Vec<_>>();
+    let total_mean = total_mean.iter().map(|&m| m / n).collect::<Vec<_>>();
+
+    println!("🔥Total std: {:?}", total_std);
+    println!("🔥Total mean: {:?}", total_mean);
+
+    Ok(())
+}
diff --git a/py-kornia/Cargo.lock b/py-kornia/Cargo.lock
deleted file mode 100644
index a086d85e..00000000
--- a/py-kornia/Cargo.lock
+++ /dev/null
@@ -1,1596 +0,0 @@
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-# It is not intended for manual editing.
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diff --git a/src/core.rs b/src/core.rs
new file mode 100644
index 00000000..d2aeeec8
--- /dev/null
+++ b/src/core.rs
@@ -0,0 +1,78 @@
+// reference: https://www.strchr.com/standard_deviation_in_one_pass
+use crate::image::Image;
+
+/// Compute the mean and standard deviation of an image.
+///
+/// The mean and standard deviation are computed for each channel
+/// of the image in one pass.
+///
+/// # Arguments
+///
+/// * `image` - The input image to compute the mean and standard deviation.
+///
+/// # Returns
+///
+/// A tuple containing the mean and standard deviation of the image.
+/// The first element of the tuple is the standard deviation and the
+/// second element is the mean.
+///
+/// # Example
+///
+/// ```
+/// use kornia_rs::image::{Image, ImageSize};
+///
+/// let image = Image::<u8, 3>::new(
+///    ImageSize {
+///      width: 2,
+///      height: 2,
+///  },
+/// vec![0, 1, 2, 253, 254, 255, 128, 129, 130, 64, 65, 66],
+/// ).unwrap();
+///
+/// let (std, mean) = kornia_rs::core::std_mean(&image);
+/// assert_eq!(std, [93.5183805462862, 93.5183805462862, 93.5183805462862]);
+/// assert_eq!(mean, [111.25, 112.25, 113.25]);
+/// ```
+pub fn std_mean(image: &Image<u8, 3>) -> (Vec<f64>, Vec<f64>) {
+    let (sum, sq_sum) = image.data.indexed_iter().fold(
+        ([0f64; 3], [0f64; 3]),
+        |(mut sum, mut sq_sum), ((_, _, c), val)| {
+            sum[c] += *val as f64;
+            sq_sum[c] += (*val as f64).powi(2);
+            (sum, sq_sum)
+        },
+    );
+
+    let n = (image.width() * image.height()) as f64;
+    let mean = sum.iter().map(|&s| s / n).collect::<Vec<_>>();
+
+    let variance = sq_sum
+        .iter()
+        .zip(mean.iter())
+        .map(|(&sq_s, &m)| (sq_s / n - m.powi(2)).sqrt())
+        .collect::<Vec<_>>();
+
+    (variance, mean)
+}
+
+#[cfg(test)]
+mod tests {
+    use crate::image::{Image, ImageSize};
+    use anyhow::{Ok, Result};
+
+    #[test]
+    fn test_std_mean() -> Result<()> {
+        let image = Image::<u8, 3>::new(
+            ImageSize {
+                width: 2,
+                height: 2,
+            },
+            vec![0, 1, 2, 253, 254, 255, 128, 129, 130, 64, 65, 66],
+        )?;
+
+        let (std, mean) = super::std_mean(&image);
+        assert_eq!(std, [93.5183805462862, 93.5183805462862, 93.5183805462862]);
+        assert_eq!(mean, [111.25, 112.25, 113.25]);
+        Ok(())
+    }
+}
diff --git a/src/lib.rs b/src/lib.rs
index 9012e82f..c5192c74 100644
--- a/src/lib.rs
+++ b/src/lib.rs
@@ -1,4 +1,5 @@
 pub mod color;
+pub mod core;
 // NOTE: not ready yet
 // pub mod distance_transform;
 pub mod flip;

From 9d61f79ed0ed0f1b878694d8eefad3a38ce09a65 Mon Sep 17 00:00:00 2001
From: edgar <edgar.riba@gmail.com>
Date: Sun, 24 Mar 2024 20:55:12 +0100
Subject: [PATCH 2/2] add missing lock

---
 py-kornia/Cargo.lock | 1324 ++++++++++++++++++++++++++++++++++++++++++
 1 file changed, 1324 insertions(+)
 create mode 100644 py-kornia/Cargo.lock

diff --git a/py-kornia/Cargo.lock b/py-kornia/Cargo.lock
new file mode 100644
index 00000000..6b10a073
--- /dev/null
+++ b/py-kornia/Cargo.lock
@@ -0,0 +1,1324 @@
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