clean up linting and add timeout

ktmeaton · Sep 25, 2020 · 088afe3 · 088afe3
1 parent 3caee1b
commit 088afe3
Show file tree

Hide file tree

Showing 2 changed files with 1 addition and 7 deletions.
diff --git a/.github/workflows/pipeline.yaml b/.github/workflows/pipeline.yaml
@@ -29,6 +29,7 @@ jobs:
   # Install dependencies
   pipeline :
     runs-on: ubuntu-latest
+    timeout-minutes: 120
     steps:
       #------------------------------------------------------------------------#
       # Checkout Repository

diff --git a/README.md b/README.md
@@ -57,13 +57,6 @@ git clone https://github.com/ktmeaton/plague-phylogeography.git
 cd plague-phylogeography
 ```
 
-Define snakemake cache directory wherever desire
-
-```
-mkdir snakecache
-export SNAKEMAKE_OUTPUT_CACHE=`pwd`/snakecache/
-```
-
 ### Create Conda Environment
 
 ```bash