plot tree comparison

docs/results/latest/treemmer/treemmer_trimmed_list_X_249.txt → docs/results/latest/treemmer/treemmer_trimmed_list_X_247.txt

@@ -4,7 +4,7 @@ SAMEA104233047
 SAMEA104233049
 SAMEA104233048
 SAMEA3541826
-SAMEA6812876
+SAMEA6812877
 GCA_001294825.1_ASM129482v1_genomic
 GCA_001601675.1_ASM160167v1_genomic
 GCA_002127375.1_ASM212737v1_genomic
@@ -17,26 +17,23 @@ GCA_001972465.1_ASM197246v1_genomic
 GCA_008630415.1_ASM863041v1_genomic
 GCA_001972395.1_ASM197239v1_genomic
 GCA_002165475.1_ASM216547v1_genomic
-GCA_008630455.1_ASM863045v1_genomic
+GCA_015338205.1_ASM1533820v1_genomic
 GCA_001295055.1_ASM129505v1_genomic
 GCA_001972415.1_ASM197241v1_genomic
-GCA_003074415.1_ASM307441v1_genomic
+GCA_003074395.1_ASM307439v1_genomic
 GCA_001295065.1_ASM129506v1_genomic
 GCA_003085875.1_ASM308587v1_genomic
 GCA_001188715.1_ASM118871v1_genomic
 GCA_000834315.1_ASM83431v1_genomic
 GCA_001295185.1_ASM129518v1_genomic
 GCA_006376505.1_ASM637650v1_genomic
-GCA_000834985.1_ASM83498v1_genomic
-GCA_001295045.1_ASM129504v1_genomic
-GCA_001294915.1_ASM129491v1_genomic
-GCA_006376545.1_ASM637654v1_genomic
-GCA_001188755.1_ASM118875v1_genomic
-GCA_001188935.1_ASM118893v1_genomic
+GCA_000382525.1_Yersinia_pestis_G3768_assembly_genomic
+GCA_001188695.1_ASM118869v1_genomic
 GCA_001188795.1_ASM118879v1_genomic
 GCA_001294815.1_ASM129481v1_genomic
 GCA_000382505.1_Yersinia_pestis_G1670E_assembly_genomic
-GCA_000382545.1_Yersinia_pestis_assembly_genomic
+GCA_001188335.1_DYA_1_genomic
+GCA_001294915.1_ASM129491v1_genomic
 SAMEA104488961
 GCA_000324525.1_ASM32452v1_genomic
 GCA_000007885.1_ASM788v1_genomic
@@ -45,97 +42,96 @@ GCA_001294805.1_ASM129480v1_genomic
 GCA_002188815.1_ASM218881v1_genomic
 GCA_002188845.1_ASM218884v1_genomic
 GCA_003074175.1_ASM307417v1_genomic
-GCA_000325185.1_ASM32518v1_genomic
+GCA_000324045.1_ASM32404v1_genomic
 GCA_001601735.1_ASM160173v1_genomic
 GCA_001294975.1_ASM129497v1_genomic
 GCA_001295145.1_ASM129514v1_genomic
 GCA_001972505.1_ASM197250v1_genomic
-GCA_002412235.1_Y.pestis_A-1249_genomic
+GCA_001294885.1_ASM129488v1_genomic
 GCA_002188685.1_ASM218868v1_genomic
 GCA_003085955.1_ASM308595v1_genomic
 GCA_003086035.1_ASM308603v1_genomic
 GCA_002188725.1_ASM218872v1_genomic
 GCA_002188765.1_ASM218876v1_genomic
-GCA_015336865.1_ASM1533686v1_genomic
+GCA_001294965.1_ASM129496v1_genomic
 GCA_001972475.1_ASM197247v1_genomic
 GCA_002188755.1_ASM218875v1_genomic
 GCA_002173795.1_ASM217379v1_genomic
 GCA_002173805.1_ASM217380v1_genomic
 GCA_002188775.1_ASM218877v1_genomic
 GCA_001972515.1_ASM197251v1_genomic
 GCA_002173815.1_ASM217381v1_genomic
-GCA_000834925.1_ASM83492v1_genomic
-GCA_000323625.1_ASM32362v1_genomic
+GCA_000182545.1_ASM18254v1_genomic
+GCA_000320425.1_ASM32042v1_genomic
 GCA_006546725.1_ASM654672v1_genomic
-GCA_006517425.1_ASM651742v1_genomic
 GCA_000950945.1_ASM95094v1_genomic
 GCA_002981915.1_ASM298191v1_genomic
 GCA_006546745.1_ASM654674v1_genomic
 GCA_002981925.1_ASM298192v1_genomic
-GCA_003122795.1_Y.pestis_I-2422_genomic
+GCA_006546665.1_ASM654666v1_genomic
 GCA_000323665.1_ASM32366v1_genomic
 GCA_000324205.1_ASM32420v1_genomic
 GCA_000324225.1_ASM32422v1_genomic
-GCA_009667985.1_ASM966798v1_genomic
+GCA_009670665.1_ASM967066v1_genomic
+GCA_009669605.1_ASM966960v1_genomic
+GCA_009670245.1_ASM967024v1_genomic
 SAMEA1061800
 SAMEA5661365
 SAMEA5661385
 SAMEA5661367
-SAMEA4354665
 GCA_002412245.1_Y.pestis_A-1691_genomic
 GCA_003074595.1_ASM307459v1_genomic
 GCA_002412255.1_Y.pestis_A-1836_genomic
-GCA_003074535.1_ASM307453v1_genomic
+GCA_015274715.1_ASM1527471v1_genomic
 GCA_000169675.1_ASM16967v1_genomic
 GCA_001188675.1_ASM118867v1_genomic
 GCA_002412225.1_Y.pestis_A-1486_genomic
 GCA_000323385.1_ASM32338v1_genomic
-GCA_000734805.1_ASM73480v1_genomic
+GCA_000324165.1_ASM32416v1_genomic
 GCA_000323505.1_ASM32350v1_genomic
-GCA_000324325.1_ASM32432v1_genomic
+GCA_000323765.1_ASM32376v1_genomic
 GCA_013391965.1_ASM1339196v1_genomic
 GCA_002188855.1_ASM218885v1_genomic
 GCA_013391945.1_ASM1339194v1_genomic
 GCA_000325305.1_ASM32530v1_genomic
-GCA_000325245.1_ASM32524v1_genomic
+GCA_000325285.1_ASM32528v1_genomic
 GCA_000325225.1_ASM32522v1_genomic
 GCA_009363195.1_ASM936319v1_genomic
 GCA_003086015.1_ASM308601v1_genomic
-GCA_015338045.1_ASM1533804v1_genomic
+GCA_015337085.1_ASM1533708v1_genomic
 GCA_003074235.1_ASM307423v1_genomic
-GCA_003085915.1_ASM308591v1_genomic
-GCA_003074315.1_ASM307431v1_genomic
-GCA_000324585.1_ASM32458v1_genomic
+GCA_015336265.1_ASM1533626v1_genomic
+GCA_009295945.1_ASM929594v1_genomic
+GCA_000324565.1_ASM32456v1_genomic
 GCA_000324505.1_ASM32450v1_genomic
 GCA_000324305.1_ASM32430v1_genomic
 GCA_000324965.1_ASM32496v1_genomic
 GCA_002188835.1_ASM218883v1_genomic
 GCA_000323465.1_ASM32346v1_genomic
-GCA_015336465.1_ASM1533646v1_genomic
-GCA_000834275.1_ASM83427v1_genomic
-GCA_000323905.1_ASM32390v1_genomic
+GCA_001601285.1_ASM160128v1_genomic
+GCA_000834885.1_ASM83488v1_genomic
+GCA_000323925.1_ASM32392v1_genomic
 GCA_000320445.1_ASM32044v1_genomic
 GCA_000475135.2_YPS03_v2_genomic
 GCA_015159045.1_ASM1515904v1_genomic
-GCA_000182485.1_ASM18248v1_genomic
+GCA_002005285.1_ASM200528v1_genomic
 GCA_000323305.1_ASM32330v1_genomic
-GCA_015158675.1_ASM1515867v1_genomic
-GCA_000323345.1_ASM32334v1_genomic
+GCA_015158765.1_ASM1515876v1_genomic
 GCA_015158705.1_ASM1515870v1_genomic
-GCA_015159035.1_ASM1515903v1_genomic
-GCA_015158715.1_ASM1515871v1_genomic
+GCA_015158955.1_ASM1515895v1_genomic
+GCA_015158815.1_ASM1515881v1_genomic
 GCA_003074275.1_ASM307427v1_genomic
-GCA_008630435.1_ASM863043v1_genomic
+GCA_006376575.1_ASM637657v1_genomic
 GCA_000324945.1_ASM32494v1_genomic
 GCA_000325085.1_ASM32508v1_genomic
-GCA_013392055.1_ASM1339205v1_genomic
-GCA_000325025.1_ASM32502v1_genomic
-GCA_000324025.1_ASM32402v1_genomic
+GCA_000325325.1_ASM32532v1_genomic
+GCA_000324605.1_ASM32460v1_genomic
+GCA_000325105.1_ASM32510v1_genomic
 GCA_016102545.1_ASM1610254v1_genomic
 GCA_010974855.1_ASM1097485v1_genomic
 GCA_016102565.1_ASM1610256v1_genomic
 GCA_016102575.1_ASM1610257v1_genomic
-GCA_001617735.1_Yersinia_pestis_M-1763_genomic
+GCA_003074295.1_ASM307429v1_genomic
 GCA_002412305.1_Y.pestis_A-1809_genomic
 GCA_003086115.1_ASM308611v1_genomic
 GCA_000323245.1_ASM32324v1_genomic
@@ -144,77 +140,67 @@ GCA_016102645.1_ASM1610264v1_genomic
 GCA_010974835.1_ASM1097483v1_genomic
 GCA_016102555.1_ASM1610255v1_genomic
 GCA_016102775.1_ASM1610277v1_genomic
-GCA_016102685.1_ASM1610268v1_genomic
-GCA_006376435.1_ASM637643v1_genomic
-GCA_006376415.1_ASM637641v1_genomic
-GCA_001559935.1_ASM155993v1_genomic
-GCA_006376495.1_ASM637649v1_genomic
-GCA_006376535.1_ASM637653v1_genomic
-GCA_015159615.1_ASM1515961v1_genomic
-GCA_000182705.1_ASM18270v1_genomic
-GCA_003074335.1_ASM307433v1_genomic
-IP557
+GCA_016102665.1_ASM1610266v1_genomic
 GCA_009296005.1_ASM929600v1_genomic
 GCA_010974845.1_ASM1097484v1_genomic
 GCA_016102655.1_ASM1610265v1_genomic
 GCA_009909655.1_ASM990965v1_genomic
 GCA_001617725.1_Yersinia_pestis_M-1484_genomic
 GCA_015337645.1_ASM1533764v1_genomic
-GCA_016102585.1_ASM1610258v1_genomic
+GCA_016102845.1_ASM1610284v1_genomic
 GCA_001617715.1_Yersinia_pestis_M-519_genomic
-GCA_016102745.1_ASM1610274v1_genomic
+GCA_016102875.1_ASM1610287v1_genomic
+GCA_003085975.1_ASM308597v1_genomic
+GCA_015350455.1_ASM1535045v1_genomic
+GCA_001617815.1_Yersinia_pestis_M-1453_genomic
+GCA_016102965.1_ASM1610296v1_genomic
 GCA_008630395.1_ASM863039v1_genomic
-GCA_003086055.1_ASM308605v1_genomic
-GCA_001617705.1_Yersinia_pestis_C-791_genomic
-GCA_016102765.1_ASM1610276v1_genomic
+GCA_001595585.1_ASM159558v1_genomic
+GCA_001613885.1_ASM161388v1_genomic
 GCA_001617785.1_Yersinia_pestis_M-549_genomic
-GCA_001188815.1_ASM118881v1_genomic
 GCA_001617805.1_Yersinia_pestis_173_genomic
-GCA_000323645.1_ASM32364v1_genomic
+GCA_006376435.1_ASM637643v1_genomic
+GCA_006376495.1_ASM637649v1_genomic
+GCA_006376535.2_ASM637653v2_genomic
+GCA_015337445.1_ASM1533744v1_genomic
+GCA_015336085.1_ASM1533608v1_genomic
+GCA_001559935.1_ASM155993v1_genomic
+GCA_000169655.1_ASM16965v1_genomic
 SAMEA5818806
-SAMEA7293136
-SAMEA5818817
-SAMEA7313243_45
-SAMEA5818800
-SAMEA7293135
-SAMEA7313236_38
-SAMEA3713714
-SAMEA5818808
-SAMEA7313246_49
 SAMN00715800
 SAMEA5054089
-SAMEA5054090
+SAMEA3937654
 GCA_000169615.1_ASM16961v1_genomic
-GCA_000835005.1_ASM83500v1_genomic
-GCA_000325165.1_ASM32516v1_genomic
-GCA_015158485.1_ASM1515848v1_genomic
-GCA_015158615.1_ASM1515861v1_genomic
-GCA_000323745.1_ASM32374v1_genomic
-GCA_000323445.1_ASM32344v1_genomic
-GCA_000324685.1_ASM32468v1_genomic
+IP542
+GCA_000323965.1_ASM32396v1_genomic
+GCA_000324285.1_ASM32428v1_genomic
+GCA_000323785.1_ASM32378v1_genomic
+GCA_000323885.1_ASM32388v1_genomic
+GCA_000324705.1_ASM32470v1_genomic
 GCA_000022805.1_ASM2280v1_genomic
-GCA_000324365.1_ASM32436v1_genomic
-GCA_000323985.1_ASM32398v1_genomic
+GCA_000324825.1_ASM32482v1_genomic
 GCA_900460465.1_57940_B01_genomic
-GCA_003798085.1_ASM379808v1_genomic
+GCA_000834905.1_ASM83490v1_genomic
 IP579
-GCA_000168235.2_ASM16823v2_genomic
-GCA_000475095.2_YP009_v2_genomic
-GCA_000475115.2_YP113_v2_genomic
-GCA_001509855.1_ASM150985v1_genomic
-GCA_001509865.1_ASM150986v1_genomic
-GCA_000255815.1_ASM25581v1_genomic
-GCA_000834495.1_ASM83449v1_genomic
-GCA_000834775.1_ASM83477v1_genomic
+GCA_000834335.1_ASM83433v1_genomic
+GCA_000705315.1_EDB10_058v1_genomic
 GCA_001693595.1_ASM169359v1_genomic
 Reference
+GCA_001509865.1_ASM150986v1_genomic
+GCA_000255835.1_ASM25583v1_genomic
+GCA_000255875.1_ASM25587v1_genomic
 GCA_000268525.1_ASM26852v1_genomic
 GCA_000475155.2_YP24H_v2_genomic
-GCA_000268985.1_ASM26898v1_genomic
-GCA_000269025.1_ASM26902v1_genomic
-GCA_013421465.1_ASM1342146v1_genomic
-GCA_000325405.1_ASM32540v1_genomic
-GCA_000986995.1_YPES001-SEQ-2-ASM-1_genomic
+GCA_000269005.1_ASM26900v1_genomic
+GCA_000324805.2_EV76-CN_genomic
+GCA_000590535.1_EV_NIIEG_genomic
+GCA_000475095.2_YP009_v2_genomic
+GCA_000475115.2_YP113_v2_genomic
+GCA_000324425.1_ASM32442v1_genomic
+GCA_000325425.1_ASM32542v1_genomic
+GCA_000834235.1_ASM83423v1_genomic
+GCA_013421535.1_ASM1342153v1_genomic
+GCA_000182525.1_ASM18252v1_genomic
 GCA_001487065.1_Yersinia_pestis_genomic
 GCA_003797205.1_ASM379720v1_genomic
 GCA_000269465.1_ASM26946v1_genomic
@@ -223,27 +209,39 @@ GCA_000268325.1_ASM26832v1_genomic
 GCA_000268345.1_ASM26834v1_genomic
 GCA_000268465.1_ASM26846v1_genomic
 GCA_000268545.1_ASM26854v1_genomic
-GCA_000268365.1_ASM26836v1_genomic
-GCA_000268405.1_ASM26840v1_genomic
-GCA_000268825.1_ASM26882v1_genomic
+GCA_000268565.1_ASM26856v1_genomic
+GCA_000268625.1_ASM26862v1_genomic
+GCA_000268385.1_ASM26838v1_genomic
+GCA_000268445.1_ASM26844v1_genomic
+GCA_000269065.1_ASM26906v1_genomic
+GCA_000268905.1_ASM26890v1_genomic
 GCA_000268925.1_ASM26892v1_genomic
 GCA_000268725.2_ASM26872v2_genomic
 GCA_000268805.2_ASM26880v2_genomic
-GCA_000269445.1_ASM26944v1_genomic
-GCA_000268685.1_ASM26868v1_genomic
-GCA_000268485.1_ASM26848v1_genomic
-GCA_000269205.1_ASM26920v1_genomic
+GCA_000311885.1_ASM31188v1_genomic
+GCA_000268485.2_ASM26848v2_genomic
+GCA_000269045.1_ASM26904v1_genomic
+GCA_000268865.1_ASM26886v1_genomic
 GCA_000268665.1_ASM26866v1_genomic
 GCA_000269165.1_ASM26916v1_genomic
+GCA_000268965.1_ASM26896v1_genomic
 GCA_000269405.1_ASM26940v1_genomic
+GCA_000268765.1_ASM26876v1_genomic
+GCA_000268645.1_ASM26864v1_genomic
+GCA_000269345.1_ASM26934v1_genomic
 GCA_000269285.2_ASM26928v2_genomic
 GCA_000269245.1_ASM26924v1_genomic
 GCA_000268945.1_ASM26894v1_genomic
-GCA_000269485.1_ASM26948v1_genomic
-GCA_000268645.1_ASM26864v1_genomic
-GCA_000269345.1_ASM26934v1_genomic
-GCA_000269385.1_ASM26938v1_genomic
-GCA_000269045.1_ASM26904v1_genomic
-GCA_000268865.1_ASM26886v1_genomic
+GCA_000269205.1_ASM26920v1_genomic
+GCA_000324405.1_ASM32440v1_genomic
 GCA_000324105.1_ASM32410v1_genomic
+SAMEA5818809
+SAMEA5818817
+SAMEA5818805
+SAMEA7313243_45
+SAMEA5818800
+SAMEA7293135
+SAMEA7313236_38
+SAMEA3713715
+SAMEA5818803
 GCA_000323485.1_ASM32348v1_genomic