From 5e1ba24aeb30522e438a8668b5247c72a6ab9169 Mon Sep 17 00:00:00 2001
From: Katherine Eaton <ktmeaton@gmail.com>
Date: Tue, 2 Mar 2021 08:18:05 -0500
Subject: [PATCH] update markdownlint workflow

---
 .github/workflows/lint.yaml     | 1 +
 .pre-commit-config.yaml         | 2 +-
 docs/notes/Notes_Development.md | 1 +
 3 files changed, 3 insertions(+), 1 deletion(-)

diff --git a/.github/workflows/lint.yaml b/.github/workflows/lint.yaml
index 6e056c14e..4493f8174 100644
--- a/.github/workflows/lint.yaml
+++ b/.github/workflows/lint.yaml
@@ -69,6 +69,7 @@ jobs:
           markdownlint \
             -c ${GITHUB_WORKSPACE}/.github/markdown_lint.yaml \
             -i 'narratives/*.md' \
+            -i CHANGELOG.md \
             $(find ${GITHUB_WORKSPACE} -name "*.md")
   #----------------------------------------------------------------------------#
   # YAML template from nf-core eager to trial
diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml
index a625431e6..8762b5acb 100644
--- a/.pre-commit-config.yaml
+++ b/.pre-commit-config.yaml
@@ -48,7 +48,7 @@ repos:
     hooks:
       - id: markdownlint
         args: [--config=.github/markdown_lint.yaml]
-        exclude: narratives/.*.md
+        exclude: narratives/.*.md CHANGELOG.md
 
   # Rst Lint
   - repo: https://github.com/myint/rstcheck
diff --git a/docs/notes/Notes_Development.md b/docs/notes/Notes_Development.md
index 6153baa4e..42b09f33f 100644
--- a/docs/notes/Notes_Development.md
+++ b/docs/notes/Notes_Development.md
@@ -20,3 +20,4 @@
 1. Check if multiqc still runs without eager output dir...
 1. Add latvia samples to database!
 1. Maybe write a function to condense exporting.
+1. Start working on geo notebook. Add cartopy.