add outgroups ftp links

ktmeaton · Jun 16, 2020 · 6203356 · 6203356
1 parent 8cd7905
commit 6203356
Showing 1 changed file with 2 additions and 0 deletions.
diff --git a/nextflow.config b/nextflow.config
@@ -91,6 +91,8 @@ params{
   reference_genome_gb_ftp = "ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/065/GCF_000009065.1_ASM906v1/GCF_000009065.1_ASM906v1_genomic.gbff.gz"
   reference_genome_gff_ftp = "ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/065/GCF_000009065.1_ASM906v1/GCF_000009065.1_ASM906v1_genomic.gff.gz"
 
+  outgroup_genome_1_fna = "ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/798/285/GCA_003798285.1_ASM379828v1/GCA_003798285.1_ASM379828v1_genomic.fna.gz"
+  outgroup_genome_2_fna = "ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/834/295/GCA_000834295.1_ASM83429v1/GCA_000834295.1_ASM83429v1_genomic.fna.gz"
 
   // Snippy Parameters
   snippy_ctg_depth = 10