fix bad command if check

ktmeaton · Jul 25, 2020 · 6db86a2 · 6db86a2
1 parent a3b8d33
commit 6db86a2
Showing 1 changed file with 4 additions and 4 deletions.
diff --git a/scripts/uninstall.sh b/scripts/uninstall.sh
@@ -11,15 +11,15 @@ REPO=${1:-"ktmeaton/plague-phylogeography"}
 STEPS="5"
 # Get plague-phylogeography conda name
 PHYLO_CONDA_ENV="plague-phylogeography-0.1.4dev"
-if [[ `-f ~/.nextflow/assets/${REPO}/environment.yaml` ]]; then
+if [[ -f ~/.nextflow/assets/${REPO}/environment.yaml ]]; then
   PHYLO_CONDA_ENV=`grep "name:" ~/.nextflow/assets/${REPO}/environment.yaml |  \
                    cut -d " " -f 2`
 fi
 
 
 # Remove the plague-phylogeography pipeline and conda environment
 echo "[1/${STEPS}] Removing the plague-phylogeography nextflow pipeline."
-if [[ `-f ~/.nextflow/assets/${REPO}/environment.yaml` ]]; then
+if [[ -f ~/.nextflow/assets/${REPO}/environment.yaml ]]; then
   PHYLO_CONDA_ENV=`grep "name:" ~/.nextflow/assets/${REPO}/environment.yaml |  \
                    cut -d " " -f 2`
   nextflow drop ${REPO}
@@ -31,7 +31,7 @@ fi
 
 # Remove the nfcore/eager pipeline
 echo "[3/${STEPS}] Removing the nf-core/eager nextflow pipeline."
-if [[ `-f ~/.nextflow/assets/nf-core/eager/environment.yaml` ]]; then
+if [[ -f ~/.nextflow/assets/nf-core/eager/environment.yaml ]]; then
   EAGER_CONDA_ENV=`grep "name:" ~/.nextflow/assets/nf-core/eager/environment.yaml |  \
                    cut -d " " -f 2`
   nextflow drop nf-core/eager
@@ -43,7 +43,7 @@ fi
 
 # Remove the nextstrain conda env
 echo "[5/${STEPS}] Removing the nextstrain conda environment."
-if [[ `-f ~/.nextflow/assets/${REPO}/config/nextstrain.yaml` ]]; then
+if [[ -f ~/.nextflow/assets/${REPO}/config/nextstrain.yaml ]]; then
   NEXTSTRAIN_CONDA_ENV=`grep "name:" ~/.nextflow/assets/${REPO}/config/nextstrain.yaml |  \
                    cut -d " " -f 2`
   conda remove -n ${NEXTSTRAIN_CONDA_ENV} --all