test if file change detected

ktmeaton · Oct 9, 2020 · 7a9d0d4 · 7a9d0d4
1 parent 77f5694
commit 7a9d0d4
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Showing 2 changed files with 5 additions and 3 deletions.
diff --git a/.github/workflows/docker.yaml b/.github/workflows/docker.yaml
@@ -40,7 +40,7 @@ jobs:
             *.yaml
 
       - name: build docker image - plot
-        if: steps.git-diff.outputs.diff
+        if: steps.git-diff.outputs.diff =~ "workflow/envs/plot.yaml"
         run:
           cd workflow/envs/plot;
           docker build --no-cache . -t ktmeaton/plague-phylogeography:plot;

diff --git a/workflow/envs/plot/Dockerfile b/workflow/envs/plot/Dockerfile
@@ -2,5 +2,7 @@ FROM continuumio/miniconda3
 LABEL authors="Katherine Eaton" \
       description="Docker image containing dependencies for plague-phylogeography: plot."
 COPY plot.yaml /
-RUN conda install -c conda-forge mamba && mamba env create -f /plot.yaml && conda clean -a
-ENV PATH /opt/conda/envs/plague-phylogeography-plot/bin:$PATH
+RUN conda install -c conda-forge mamba; \
+    mamba env create -f /plot.yaml; \
+    conda clean -a; \
+    echo "source activate plague-phylogeography-plot" > ~/.bashrc;